Protein–RNA interactions for Protein: Q8JZS7

Hmgcll1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcll1Q8JZS7 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hmgcll1Q8JZS7 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC17.76■□□□□ 0.43
Hmgcll1Q8JZS7 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hmgcll1Q8JZS7 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hmgcll1Q8JZS7 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hmgcll1Q8JZS7 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC17.76■□□□□ 0.43
Hmgcll1Q8JZS7 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.76■□□□□ 0.43
Hmgcll1Q8JZS7 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Hmgcll1Q8JZS7 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Hmgcll1Q8JZS7 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC17.76■□□□□ 0.43
Hmgcll1Q8JZS7 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC17.76■□□□□ 0.43
Hmgcll1Q8JZS7 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Hmgcll1Q8JZS7 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC17.76■□□□□ 0.43
Hmgcll1Q8JZS7 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Hmgcll1Q8JZS7 Gm21559-201ENSMUST00000220638 855 ntBASIC17.76■□□□□ 0.43
Hmgcll1Q8JZS7 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.76■□□□□ 0.43
Hmgcll1Q8JZS7 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hmgcll1Q8JZS7 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hmgcll1Q8JZS7 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC17.76■□□□□ 0.43
Hmgcll1Q8JZS7 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hmgcll1Q8JZS7 Gm8587-201ENSMUST00000076538 843 ntBASIC17.76■□□□□ 0.43
Hmgcll1Q8JZS7 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Hmgcll1Q8JZS7 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hmgcll1Q8JZS7 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hmgcll1Q8JZS7 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hmgcll1Q8JZS7 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Hmgcll1Q8JZS7 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hmgcll1Q8JZS7 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
Hmgcll1Q8JZS7 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hmgcll1Q8JZS7 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hmgcll1Q8JZS7 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Hmgcll1Q8JZS7 Gm6728-201ENSMUST00000178117 1065 ntBASIC17.75■□□□□ 0.43
Hmgcll1Q8JZS7 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Hmgcll1Q8JZS7 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hmgcll1Q8JZS7 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hmgcll1Q8JZS7 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hmgcll1Q8JZS7 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Hmgcll1Q8JZS7 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hmgcll1Q8JZS7 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hmgcll1Q8JZS7 AC154855.1-201ENSMUST00000227353 1458 ntBASIC17.75■□□□□ 0.43
Hmgcll1Q8JZS7 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hmgcll1Q8JZS7 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.74■□□□□ 0.43
Hmgcll1Q8JZS7 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hmgcll1Q8JZS7 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.74■□□□□ 0.43
Hmgcll1Q8JZS7 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Hmgcll1Q8JZS7 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Hmgcll1Q8JZS7 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hmgcll1Q8JZS7 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hmgcll1Q8JZS7 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hmgcll1Q8JZS7 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Hmgcll1Q8JZS7 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Hmgcll1Q8JZS7 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Hmgcll1Q8JZS7 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hmgcll1Q8JZS7 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Hmgcll1Q8JZS7 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Hmgcll1Q8JZS7 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Hmgcll1Q8JZS7 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Hmgcll1Q8JZS7 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC17.74■□□□□ 0.43
Hmgcll1Q8JZS7 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Hmgcll1Q8JZS7 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hmgcll1Q8JZS7 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.74■□□□□ 0.43
Hmgcll1Q8JZS7 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Hmgcll1Q8JZS7 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hmgcll1Q8JZS7 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hmgcll1Q8JZS7 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hmgcll1Q8JZS7 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Hmgcll1Q8JZS7 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.73■□□□□ 0.43
Hmgcll1Q8JZS7 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hmgcll1Q8JZS7 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hmgcll1Q8JZS7 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hmgcll1Q8JZS7 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC17.73■□□□□ 0.43
Hmgcll1Q8JZS7 Gm3272-201ENSMUST00000181181 1229 ntBASIC17.73■□□□□ 0.43
Hmgcll1Q8JZS7 Gm27389-201ENSMUST00000183622 195 ntBASIC17.73■□□□□ 0.43
Hmgcll1Q8JZS7 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC17.73■□□□□ 0.43
Hmgcll1Q8JZS7 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hmgcll1Q8JZS7 Gm10566-201ENSMUST00000086739 996 ntBASIC17.73■□□□□ 0.43
Hmgcll1Q8JZS7 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Hmgcll1Q8JZS7 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Hmgcll1Q8JZS7 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.73■□□□□ 0.43
Hmgcll1Q8JZS7 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.73■□□□□ 0.43
Hmgcll1Q8JZS7 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Hmgcll1Q8JZS7 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hmgcll1Q8JZS7 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.73■□□□□ 0.43
Hmgcll1Q8JZS7 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hmgcll1Q8JZS7 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hmgcll1Q8JZS7 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.73■□□□□ 0.43
Hmgcll1Q8JZS7 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hmgcll1Q8JZS7 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hmgcll1Q8JZS7 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hmgcll1Q8JZS7 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hmgcll1Q8JZS7 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hmgcll1Q8JZS7 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hmgcll1Q8JZS7 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hmgcll1Q8JZS7 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Hmgcll1Q8JZS7 AA414768-201ENSMUST00000121924 1257 ntBASIC17.72■□□□□ 0.43
Hmgcll1Q8JZS7 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Hmgcll1Q8JZS7 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Hmgcll1Q8JZS7 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hmgcll1Q8JZS7 Gm18958-201ENSMUST00000174258 762 ntBASIC17.72■□□□□ 0.43
Hmgcll1Q8JZS7 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms