Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Syne4Q8CII8 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Syne4Q8CII8 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Syne4Q8CII8 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC19.53■□□□□ 0.72
Syne4Q8CII8 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Syne4Q8CII8 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Syne4Q8CII8 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Syne4Q8CII8 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Syne4Q8CII8 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Syne4Q8CII8 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Syne4Q8CII8 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Syne4Q8CII8 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC19.52■□□□□ 0.72
Syne4Q8CII8 Mir8112-201ENSMUST00000184382 131 ntBASIC19.52■□□□□ 0.72
Syne4Q8CII8 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC19.52■□□□□ 0.72
Syne4Q8CII8 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Syne4Q8CII8 AC153889.1-201ENSMUST00000219257 330 ntBASIC19.52■□□□□ 0.72
Syne4Q8CII8 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
Syne4Q8CII8 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Syne4Q8CII8 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Syne4Q8CII8 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
Syne4Q8CII8 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Syne4Q8CII8 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC19.51■□□□□ 0.71
Syne4Q8CII8 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Syne4Q8CII8 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Syne4Q8CII8 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC19.51■□□□□ 0.71
Syne4Q8CII8 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC19.51■□□□□ 0.71
Syne4Q8CII8 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Syne4Q8CII8 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Syne4Q8CII8 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Syne4Q8CII8 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Syne4Q8CII8 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC19.51■□□□□ 0.71
Syne4Q8CII8 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Syne4Q8CII8 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Syne4Q8CII8 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Syne4Q8CII8 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Syne4Q8CII8 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Syne4Q8CII8 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Syne4Q8CII8 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Syne4Q8CII8 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.5■□□□□ 0.71
Syne4Q8CII8 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Syne4Q8CII8 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Syne4Q8CII8 Gm25925-201ENSMUST00000158314 306 ntBASIC19.5■□□□□ 0.71
Syne4Q8CII8 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC19.5■□□□□ 0.71
Syne4Q8CII8 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC19.5■□□□□ 0.71
Syne4Q8CII8 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Syne4Q8CII8 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Syne4Q8CII8 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Syne4Q8CII8 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Syne4Q8CII8 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.5■□□□□ 0.71
Syne4Q8CII8 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Syne4Q8CII8 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Syne4Q8CII8 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Syne4Q8CII8 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC19.49■□□□□ 0.71
Syne4Q8CII8 Gm10052-201ENSMUST00000168019 960 ntBASIC19.49■□□□□ 0.71
Syne4Q8CII8 Gm18733-201ENSMUST00000173950 856 ntBASIC19.49■□□□□ 0.71
Syne4Q8CII8 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Syne4Q8CII8 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Syne4Q8CII8 Gm7729-201ENSMUST00000050143 801 ntBASIC19.49■□□□□ 0.71
Syne4Q8CII8 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Syne4Q8CII8 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Syne4Q8CII8 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Syne4Q8CII8 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Syne4Q8CII8 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Syne4Q8CII8 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Syne4Q8CII8 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Syne4Q8CII8 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC19.49■□□□□ 0.71
Syne4Q8CII8 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Syne4Q8CII8 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Syne4Q8CII8 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Syne4Q8CII8 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Syne4Q8CII8 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC19.48■□□□□ 0.71
Syne4Q8CII8 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Syne4Q8CII8 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Syne4Q8CII8 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Syne4Q8CII8 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Syne4Q8CII8 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Syne4Q8CII8 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
Syne4Q8CII8 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Syne4Q8CII8 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Syne4Q8CII8 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Syne4Q8CII8 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Syne4Q8CII8 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Syne4Q8CII8 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Syne4Q8CII8 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Syne4Q8CII8 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC19.47■□□□□ 0.71
Syne4Q8CII8 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Syne4Q8CII8 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Syne4Q8CII8 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Syne4Q8CII8 Zkscan4-202ENSMUST00000225845 1506 ntBASIC19.47■□□□□ 0.71
Syne4Q8CII8 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Syne4Q8CII8 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Syne4Q8CII8 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC19.47■□□□□ 0.71
Syne4Q8CII8 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Syne4Q8CII8 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Syne4Q8CII8 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Syne4Q8CII8 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Syne4Q8CII8 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Syne4Q8CII8 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Syne4Q8CII8 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Syne4Q8CII8 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms