Protein–RNA interactions for Protein: Q8CIG0

Depdc1a, DEP domain-containing protein 1A, mousemouse

Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1aQ8CIG0 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC19.46■□□□□ 0.71
Depdc1aQ8CIG0 Gm27000-201ENSMUST00000182943 842 ntBASIC19.46■□□□□ 0.71
Depdc1aQ8CIG0 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Depdc1aQ8CIG0 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Depdc1aQ8CIG0 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Depdc1aQ8CIG0 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Depdc1aQ8CIG0 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Depdc1aQ8CIG0 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Depdc1aQ8CIG0 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Depdc1aQ8CIG0 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Depdc1aQ8CIG0 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Depdc1aQ8CIG0 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC19.46■□□□□ 0.71
Depdc1aQ8CIG0 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Depdc1aQ8CIG0 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Depdc1aQ8CIG0 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Depdc1aQ8CIG0 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Depdc1aQ8CIG0 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Depdc1aQ8CIG0 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Depdc1aQ8CIG0 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Depdc1aQ8CIG0 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Depdc1aQ8CIG0 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC19.45■□□□□ 0.7
Depdc1aQ8CIG0 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC19.45■□□□□ 0.7
Depdc1aQ8CIG0 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Depdc1aQ8CIG0 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC19.45■□□□□ 0.7
Depdc1aQ8CIG0 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Depdc1aQ8CIG0 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC19.45■□□□□ 0.7
Depdc1aQ8CIG0 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Depdc1aQ8CIG0 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Depdc1aQ8CIG0 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC19.44■□□□□ 0.7
Depdc1aQ8CIG0 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Depdc1aQ8CIG0 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Depdc1aQ8CIG0 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Depdc1aQ8CIG0 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Depdc1aQ8CIG0 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Depdc1aQ8CIG0 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
Depdc1aQ8CIG0 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Depdc1aQ8CIG0 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC19.44■□□□□ 0.7
Depdc1aQ8CIG0 Gm26039-201ENSMUST00000158152 144 ntBASIC19.44■□□□□ 0.7
Depdc1aQ8CIG0 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC19.44■□□□□ 0.7
Depdc1aQ8CIG0 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Depdc1aQ8CIG0 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Depdc1aQ8CIG0 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Depdc1aQ8CIG0 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Depdc1aQ8CIG0 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Depdc1aQ8CIG0 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Depdc1aQ8CIG0 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Depdc1aQ8CIG0 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Depdc1aQ8CIG0 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.44■□□□□ 0.7
Depdc1aQ8CIG0 Gm8258-201ENSMUST00000055593 1449 ntBASIC19.43■□□□□ 0.7
Depdc1aQ8CIG0 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Depdc1aQ8CIG0 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Depdc1aQ8CIG0 Fcho2-208ENSMUST00000224992 2964 ntBASIC19.43■□□□□ 0.7
Depdc1aQ8CIG0 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Depdc1aQ8CIG0 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Depdc1aQ8CIG0 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Depdc1aQ8CIG0 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Depdc1aQ8CIG0 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Depdc1aQ8CIG0 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
Depdc1aQ8CIG0 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Depdc1aQ8CIG0 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Depdc1aQ8CIG0 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Depdc1aQ8CIG0 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Depdc1aQ8CIG0 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Depdc1aQ8CIG0 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Depdc1aQ8CIG0 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC19.42■□□□□ 0.7
Depdc1aQ8CIG0 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Depdc1aQ8CIG0 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Depdc1aQ8CIG0 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Depdc1aQ8CIG0 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Depdc1aQ8CIG0 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC19.42■□□□□ 0.7
Depdc1aQ8CIG0 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC19.42■□□□□ 0.7
Depdc1aQ8CIG0 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Depdc1aQ8CIG0 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Depdc1aQ8CIG0 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Depdc1aQ8CIG0 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Depdc1aQ8CIG0 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Depdc1aQ8CIG0 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Depdc1aQ8CIG0 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Depdc1aQ8CIG0 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Depdc1aQ8CIG0 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Depdc1aQ8CIG0 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
Depdc1aQ8CIG0 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Depdc1aQ8CIG0 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Depdc1aQ8CIG0 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Depdc1aQ8CIG0 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Depdc1aQ8CIG0 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC19.41■□□□□ 0.7
Depdc1aQ8CIG0 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Depdc1aQ8CIG0 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Depdc1aQ8CIG0 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Depdc1aQ8CIG0 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Depdc1aQ8CIG0 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Depdc1aQ8CIG0 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC19.4■□□□□ 0.7
Depdc1aQ8CIG0 Gm5587-201ENSMUST00000206270 674 ntBASIC19.4■□□□□ 0.7
Depdc1aQ8CIG0 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Depdc1aQ8CIG0 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Depdc1aQ8CIG0 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Depdc1aQ8CIG0 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Depdc1aQ8CIG0 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC19.4■□□□□ 0.7
Depdc1aQ8CIG0 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Depdc1aQ8CIG0 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms