Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sox30Q8CGW4 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Sox30Q8CGW4 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC18.9■□□□□ 0.62
Sox30Q8CGW4 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Sox30Q8CGW4 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sox30Q8CGW4 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sox30Q8CGW4 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Sox30Q8CGW4 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Sox30Q8CGW4 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sox30Q8CGW4 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sox30Q8CGW4 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Sox30Q8CGW4 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Sox30Q8CGW4 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
Sox30Q8CGW4 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
Sox30Q8CGW4 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC18.89■□□□□ 0.61
Sox30Q8CGW4 AL590614.2-201ENSMUST00000225374 1937 ntBASIC18.89■□□□□ 0.61
Sox30Q8CGW4 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sox30Q8CGW4 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sox30Q8CGW4 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Sox30Q8CGW4 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sox30Q8CGW4 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Sox30Q8CGW4 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC18.88■□□□□ 0.61
Sox30Q8CGW4 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Sox30Q8CGW4 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sox30Q8CGW4 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sox30Q8CGW4 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sox30Q8CGW4 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sox30Q8CGW4 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sox30Q8CGW4 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sox30Q8CGW4 Gm11249-201ENSMUST00000117071 859 ntBASIC18.88■□□□□ 0.61
Sox30Q8CGW4 Gm12933-201ENSMUST00000120203 872 ntBASIC18.88■□□□□ 0.61
Sox30Q8CGW4 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sox30Q8CGW4 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sox30Q8CGW4 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
Sox30Q8CGW4 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sox30Q8CGW4 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sox30Q8CGW4 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sox30Q8CGW4 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Sox30Q8CGW4 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sox30Q8CGW4 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sox30Q8CGW4 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC18.87■□□□□ 0.61
Sox30Q8CGW4 Hivep3-201ENSMUST00000084306 2973 ntBASIC18.87■□□□□ 0.61
Sox30Q8CGW4 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sox30Q8CGW4 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sox30Q8CGW4 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.87■□□□□ 0.61
Sox30Q8CGW4 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Sox30Q8CGW4 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sox30Q8CGW4 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sox30Q8CGW4 Gm43859-201ENSMUST00000200075 1412 ntBASIC18.87■□□□□ 0.61
Sox30Q8CGW4 Gm44672-201ENSMUST00000206944 1098 ntBASIC18.87■□□□□ 0.61
Sox30Q8CGW4 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Sox30Q8CGW4 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sox30Q8CGW4 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC18.87■□□□□ 0.61
Sox30Q8CGW4 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
Sox30Q8CGW4 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sox30Q8CGW4 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sox30Q8CGW4 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC18.86■□□□□ 0.61
Sox30Q8CGW4 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sox30Q8CGW4 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Sox30Q8CGW4 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC18.86■□□□□ 0.61
Sox30Q8CGW4 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sox30Q8CGW4 AC069562.2-201ENSMUST00000224644 2146 ntBASIC18.86■□□□□ 0.61
Sox30Q8CGW4 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sox30Q8CGW4 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sox30Q8CGW4 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sox30Q8CGW4 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sox30Q8CGW4 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sox30Q8CGW4 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sox30Q8CGW4 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sox30Q8CGW4 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sox30Q8CGW4 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sox30Q8CGW4 Gm21596-201ENSMUST00000178049 1316 ntBASIC18.85■□□□□ 0.61
Sox30Q8CGW4 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sox30Q8CGW4 Gm27405-201ENSMUST00000184201 112 ntBASIC18.85■□□□□ 0.61
Sox30Q8CGW4 Gm18025-201ENSMUST00000221733 862 ntBASIC18.85■□□□□ 0.61
Sox30Q8CGW4 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sox30Q8CGW4 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Sox30Q8CGW4 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sox30Q8CGW4 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sox30Q8CGW4 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sox30Q8CGW4 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Sox30Q8CGW4 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sox30Q8CGW4 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sox30Q8CGW4 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sox30Q8CGW4 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sox30Q8CGW4 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
Sox30Q8CGW4 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Sox30Q8CGW4 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC18.84■□□□□ 0.61
Sox30Q8CGW4 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC18.84■□□□□ 0.61
Sox30Q8CGW4 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC18.84■□□□□ 0.61
Sox30Q8CGW4 Gm4974-201ENSMUST00000209974 875 ntBASIC18.84■□□□□ 0.61
Sox30Q8CGW4 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sox30Q8CGW4 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Sox30Q8CGW4 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Sox30Q8CGW4 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sox30Q8CGW4 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
Sox30Q8CGW4 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sox30Q8CGW4 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Sox30Q8CGW4 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Sox30Q8CGW4 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms