Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Smc4Q8CG47 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Smc4Q8CG47 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Smc4Q8CG47 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Smc4Q8CG47 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC21.3■■□□□ 1
Smc4Q8CG47 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Smc4Q8CG47 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Smc4Q8CG47 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC21.29■■□□□ 1
Smc4Q8CG47 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
Smc4Q8CG47 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC21.29■■□□□ 1
Smc4Q8CG47 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Smc4Q8CG47 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC21.29■■□□□ 1
Smc4Q8CG47 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC21.29■■□□□ 1
Smc4Q8CG47 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Smc4Q8CG47 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
Smc4Q8CG47 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC21.28■■□□□ 1
Smc4Q8CG47 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC21.28■■□□□ 1
Smc4Q8CG47 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC21.28■■□□□ 1
Smc4Q8CG47 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC21.28■■□□□ 1
Smc4Q8CG47 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Smc4Q8CG47 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC21.27■■□□□ 1
Smc4Q8CG47 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Smc4Q8CG47 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC21.27■■□□□ 1
Smc4Q8CG47 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC21.27■■□□□ 1
Smc4Q8CG47 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Smc4Q8CG47 Gm23634-201ENSMUST00000175071 91 ntBASIC21.27■■□□□ 1
Smc4Q8CG47 Gm27389-201ENSMUST00000183622 195 ntBASIC21.27■■□□□ 1
Smc4Q8CG47 Mir1668-201ENSMUST00000184114 107 ntBASIC21.27■■□□□ 1
Smc4Q8CG47 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC21.27■■□□□ 1
Smc4Q8CG47 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC21.27■■□□□ 1
Smc4Q8CG47 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC21.27■■□□□ 1
Smc4Q8CG47 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Smc4Q8CG47 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC21.27■■□□□ 1
Smc4Q8CG47 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC21.27■■□□□ 1
Smc4Q8CG47 Gm43182-201ENSMUST00000199476 2528 ntBASIC21.27■■□□□ 1
Smc4Q8CG47 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC21.27■■□□□ 1
Smc4Q8CG47 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC21.27■■□□□ 1
Smc4Q8CG47 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Smc4Q8CG47 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC21.27■□□□□ 0.99
Smc4Q8CG47 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
Smc4Q8CG47 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Smc4Q8CG47 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Smc4Q8CG47 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC21.26■□□□□ 0.99
Smc4Q8CG47 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
Smc4Q8CG47 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Smc4Q8CG47 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Smc4Q8CG47 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Smc4Q8CG47 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Smc4Q8CG47 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Smc4Q8CG47 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Smc4Q8CG47 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Smc4Q8CG47 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Smc4Q8CG47 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Smc4Q8CG47 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Smc4Q8CG47 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC21.25■□□□□ 0.99
Smc4Q8CG47 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Smc4Q8CG47 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Smc4Q8CG47 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
Smc4Q8CG47 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Smc4Q8CG47 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC21.25■□□□□ 0.99
Smc4Q8CG47 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Smc4Q8CG47 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Smc4Q8CG47 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Smc4Q8CG47 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Smc4Q8CG47 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Smc4Q8CG47 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Smc4Q8CG47 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC21.24■□□□□ 0.99
Smc4Q8CG47 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Smc4Q8CG47 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC21.24■□□□□ 0.99
Smc4Q8CG47 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC21.24■□□□□ 0.99
Smc4Q8CG47 Gm7213-201ENSMUST00000215977 950 ntBASIC21.24■□□□□ 0.99
Smc4Q8CG47 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Smc4Q8CG47 AC130671.1-201ENSMUST00000227384 1237 ntBASIC21.24■□□□□ 0.99
Smc4Q8CG47 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Smc4Q8CG47 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Smc4Q8CG47 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Smc4Q8CG47 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Smc4Q8CG47 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Smc4Q8CG47 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Smc4Q8CG47 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
Smc4Q8CG47 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Smc4Q8CG47 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Smc4Q8CG47 Gm5953-201ENSMUST00000220644 2616 ntBASIC21.23■□□□□ 0.99
Smc4Q8CG47 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Smc4Q8CG47 AA414768-201ENSMUST00000121924 1257 ntBASIC21.23■□□□□ 0.99
Smc4Q8CG47 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC21.23■□□□□ 0.99
Smc4Q8CG47 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC21.23■□□□□ 0.99
Smc4Q8CG47 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Smc4Q8CG47 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Smc4Q8CG47 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC21.23■□□□□ 0.99
Smc4Q8CG47 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Smc4Q8CG47 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Smc4Q8CG47 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
Smc4Q8CG47 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Smc4Q8CG47 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Smc4Q8CG47 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Smc4Q8CG47 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Smc4Q8CG47 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Smc4Q8CG47 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Smc4Q8CG47 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms