Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC21.39■■□□□ 1.01
Smc5Q8CG46 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC21.39■■□□□ 1.01
Smc5Q8CG46 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Smc5Q8CG46 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Smc5Q8CG46 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
Smc5Q8CG46 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Smc5Q8CG46 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Smc5Q8CG46 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC21.38■■□□□ 1.01
Smc5Q8CG46 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Smc5Q8CG46 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Smc5Q8CG46 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Smc5Q8CG46 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Smc5Q8CG46 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Smc5Q8CG46 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
Smc5Q8CG46 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Smc5Q8CG46 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Smc5Q8CG46 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Smc5Q8CG46 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC21.38■■□□□ 1.01
Smc5Q8CG46 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Smc5Q8CG46 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Smc5Q8CG46 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC21.37■■□□□ 1.01
Smc5Q8CG46 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Smc5Q8CG46 Gm42918-201ENSMUST00000199249 1580 ntBASIC21.37■■□□□ 1.01
Smc5Q8CG46 AC166341.7-201ENSMUST00000221698 126 ntBASIC21.37■■□□□ 1.01
Smc5Q8CG46 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Smc5Q8CG46 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Smc5Q8CG46 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Smc5Q8CG46 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Smc5Q8CG46 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Smc5Q8CG46 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Smc5Q8CG46 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Smc5Q8CG46 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Smc5Q8CG46 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC21.36■■□□□ 1.01
Smc5Q8CG46 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Smc5Q8CG46 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Smc5Q8CG46 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Smc5Q8CG46 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Smc5Q8CG46 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Smc5Q8CG46 Gm37179-201ENSMUST00000194862 823 ntBASIC21.36■■□□□ 1.01
Smc5Q8CG46 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Smc5Q8CG46 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Smc5Q8CG46 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Smc5Q8CG46 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Smc5Q8CG46 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Smc5Q8CG46 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Smc5Q8CG46 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Smc5Q8CG46 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC21.35■■□□□ 1.01
Smc5Q8CG46 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Smc5Q8CG46 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Smc5Q8CG46 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC21.35■■□□□ 1.01
Smc5Q8CG46 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Smc5Q8CG46 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Smc5Q8CG46 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Smc5Q8CG46 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Smc5Q8CG46 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC21.34■■□□□ 1.01
Smc5Q8CG46 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Smc5Q8CG46 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC21.34■■□□□ 1.01
Smc5Q8CG46 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Smc5Q8CG46 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC21.34■■□□□ 1.01
Smc5Q8CG46 Gm5408-201ENSMUST00000197998 747 ntBASIC21.34■■□□□ 1.01
Smc5Q8CG46 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Smc5Q8CG46 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Smc5Q8CG46 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Smc5Q8CG46 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Smc5Q8CG46 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC21.34■■□□□ 1.01
Smc5Q8CG46 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Smc5Q8CG46 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Smc5Q8CG46 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
Smc5Q8CG46 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
Smc5Q8CG46 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Smc5Q8CG46 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Smc5Q8CG46 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Smc5Q8CG46 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Smc5Q8CG46 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Smc5Q8CG46 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Smc5Q8CG46 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Smc5Q8CG46 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Smc5Q8CG46 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
Smc5Q8CG46 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Smc5Q8CG46 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC21.33■■□□□ 1
Smc5Q8CG46 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Smc5Q8CG46 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Smc5Q8CG46 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Smc5Q8CG46 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC21.32■■□□□ 1
Smc5Q8CG46 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Smc5Q8CG46 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC21.32■■□□□ 1
Smc5Q8CG46 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Smc5Q8CG46 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC21.32■■□□□ 1
Smc5Q8CG46 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
Smc5Q8CG46 Gm12896-201ENSMUST00000118430 226 ntBASIC21.32■■□□□ 1
Smc5Q8CG46 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC21.32■■□□□ 1
Smc5Q8CG46 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC21.32■■□□□ 1
Smc5Q8CG46 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Smc5Q8CG46 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC21.32■■□□□ 1
Smc5Q8CG46 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC21.32■■□□□ 1
Smc5Q8CG46 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Smc5Q8CG46 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Smc5Q8CG46 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Smc5Q8CG46 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Smc5Q8CG46 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms