Protein–RNA interactions for Protein: Q8CFL8

Zswim3, Zinc finger SWIM domain-containing protein 3, mousemouse

Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zswim3Q8CFL8 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Zswim3Q8CFL8 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
Zswim3Q8CFL8 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC18.88■□□□□ 0.61
Zswim3Q8CFL8 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC18.88■□□□□ 0.61
Zswim3Q8CFL8 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Zswim3Q8CFL8 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Zswim3Q8CFL8 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Zswim3Q8CFL8 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC18.88■□□□□ 0.61
Zswim3Q8CFL8 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC18.88■□□□□ 0.61
Zswim3Q8CFL8 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Zswim3Q8CFL8 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Zswim3Q8CFL8 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Zswim3Q8CFL8 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
Zswim3Q8CFL8 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Zswim3Q8CFL8 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
Zswim3Q8CFL8 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Zswim3Q8CFL8 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Zswim3Q8CFL8 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Zswim3Q8CFL8 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Zswim3Q8CFL8 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Zswim3Q8CFL8 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.87■□□□□ 0.61
Zswim3Q8CFL8 Gm1401-201ENSMUST00000122048 772 ntBASIC18.87■□□□□ 0.61
Zswim3Q8CFL8 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Zswim3Q8CFL8 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Zswim3Q8CFL8 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Zswim3Q8CFL8 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Zswim3Q8CFL8 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC18.87■□□□□ 0.61
Zswim3Q8CFL8 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC18.87■□□□□ 0.61
Zswim3Q8CFL8 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Zswim3Q8CFL8 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Zswim3Q8CFL8 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Zswim3Q8CFL8 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Zswim3Q8CFL8 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC18.87■□□□□ 0.61
Zswim3Q8CFL8 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
Zswim3Q8CFL8 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Zswim3Q8CFL8 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Zswim3Q8CFL8 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Zswim3Q8CFL8 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Zswim3Q8CFL8 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Zswim3Q8CFL8 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Zswim3Q8CFL8 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC18.86■□□□□ 0.61
Zswim3Q8CFL8 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Zswim3Q8CFL8 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Zswim3Q8CFL8 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Zswim3Q8CFL8 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Zswim3Q8CFL8 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.86■□□□□ 0.61
Zswim3Q8CFL8 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Zswim3Q8CFL8 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Zswim3Q8CFL8 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Zswim3Q8CFL8 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Zswim3Q8CFL8 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Zswim3Q8CFL8 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Zswim3Q8CFL8 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Zswim3Q8CFL8 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Zswim3Q8CFL8 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Zswim3Q8CFL8 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Zswim3Q8CFL8 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Zswim3Q8CFL8 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Zswim3Q8CFL8 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Zswim3Q8CFL8 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Zswim3Q8CFL8 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Zswim3Q8CFL8 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Zswim3Q8CFL8 AC138767.1-201ENSMUST00000222661 415 ntBASIC18.85■□□□□ 0.61
Zswim3Q8CFL8 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Zswim3Q8CFL8 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Zswim3Q8CFL8 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Zswim3Q8CFL8 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Zswim3Q8CFL8 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Zswim3Q8CFL8 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Zswim3Q8CFL8 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Zswim3Q8CFL8 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Zswim3Q8CFL8 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Zswim3Q8CFL8 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Zswim3Q8CFL8 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Zswim3Q8CFL8 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Zswim3Q8CFL8 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Zswim3Q8CFL8 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Zswim3Q8CFL8 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Zswim3Q8CFL8 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC18.84■□□□□ 0.61
Zswim3Q8CFL8 AC125350.1-201ENSMUST00000225115 903 ntBASIC18.84■□□□□ 0.61
Zswim3Q8CFL8 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Zswim3Q8CFL8 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Zswim3Q8CFL8 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Zswim3Q8CFL8 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Zswim3Q8CFL8 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Zswim3Q8CFL8 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Zswim3Q8CFL8 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Zswim3Q8CFL8 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Zswim3Q8CFL8 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Zswim3Q8CFL8 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Zswim3Q8CFL8 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.61
Zswim3Q8CFL8 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Zswim3Q8CFL8 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Zswim3Q8CFL8 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC18.83■□□□□ 0.6
Zswim3Q8CFL8 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Zswim3Q8CFL8 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Zswim3Q8CFL8 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Zswim3Q8CFL8 Zkscan4-202ENSMUST00000225845 1506 ntBASIC18.83■□□□□ 0.6
Zswim3Q8CFL8 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Zswim3Q8CFL8 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms