Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trim52Q8CDV4 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trim52Q8CDV4 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC21.36■■□□□ 1.01
Trim52Q8CDV4 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trim52Q8CDV4 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Trim52Q8CDV4 Gm27357-201ENSMUST00000183754 135 ntBASIC21.36■■□□□ 1.01
Trim52Q8CDV4 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC21.36■■□□□ 1.01
Trim52Q8CDV4 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Trim52Q8CDV4 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Trim52Q8CDV4 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trim52Q8CDV4 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Trim52Q8CDV4 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC21.35■■□□□ 1.01
Trim52Q8CDV4 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Trim52Q8CDV4 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trim52Q8CDV4 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC21.35■■□□□ 1.01
Trim52Q8CDV4 Gm13186-201ENSMUST00000118031 316 ntBASIC21.35■■□□□ 1.01
Trim52Q8CDV4 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC21.35■■□□□ 1.01
Trim52Q8CDV4 Gm27742-201ENSMUST00000184667 60 ntBASIC21.35■■□□□ 1.01
Trim52Q8CDV4 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Trim52Q8CDV4 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trim52Q8CDV4 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trim52Q8CDV4 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Trim52Q8CDV4 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trim52Q8CDV4 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trim52Q8CDV4 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Trim52Q8CDV4 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Trim52Q8CDV4 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trim52Q8CDV4 Gm18669-201ENSMUST00000216049 778 ntBASIC21.34■■□□□ 1.01
Trim52Q8CDV4 Otx2os1-206ENSMUST00000228153 787 ntBASIC21.34■■□□□ 1.01
Trim52Q8CDV4 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
Trim52Q8CDV4 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC21.34■■□□□ 1.01
Trim52Q8CDV4 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC21.34■■□□□ 1.01
Trim52Q8CDV4 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trim52Q8CDV4 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trim52Q8CDV4 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trim52Q8CDV4 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Trim52Q8CDV4 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
Trim52Q8CDV4 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Trim52Q8CDV4 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Trim52Q8CDV4 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Trim52Q8CDV4 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC21.33■■□□□ 1
Trim52Q8CDV4 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
Trim52Q8CDV4 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC21.33■■□□□ 1
Trim52Q8CDV4 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Trim52Q8CDV4 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC21.32■■□□□ 1
Trim52Q8CDV4 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Trim52Q8CDV4 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Trim52Q8CDV4 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC21.32■■□□□ 1
Trim52Q8CDV4 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Trim52Q8CDV4 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Trim52Q8CDV4 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC21.32■■□□□ 1
Trim52Q8CDV4 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
Trim52Q8CDV4 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC21.32■■□□□ 1
Trim52Q8CDV4 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC21.32■■□□□ 1
Trim52Q8CDV4 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC21.32■■□□□ 1
Trim52Q8CDV4 Gm45328-201ENSMUST00000210942 917 ntBASIC21.32■■□□□ 1
Trim52Q8CDV4 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Trim52Q8CDV4 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Trim52Q8CDV4 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Trim52Q8CDV4 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Trim52Q8CDV4 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC21.32■■□□□ 1
Trim52Q8CDV4 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Trim52Q8CDV4 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC21.31■■□□□ 1
Trim52Q8CDV4 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Trim52Q8CDV4 Gm14464-201ENSMUST00000119658 1254 ntBASIC21.31■■□□□ 1
Trim52Q8CDV4 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC21.31■■□□□ 1
Trim52Q8CDV4 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC21.31■■□□□ 1
Trim52Q8CDV4 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Trim52Q8CDV4 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC21.31■■□□□ 1
Trim52Q8CDV4 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC21.31■■□□□ 1
Trim52Q8CDV4 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
Trim52Q8CDV4 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC21.31■■□□□ 1
Trim52Q8CDV4 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC21.31■■□□□ 1
Trim52Q8CDV4 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Trim52Q8CDV4 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Trim52Q8CDV4 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Trim52Q8CDV4 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Trim52Q8CDV4 Gm5112-201ENSMUST00000204407 2368 ntBASIC21.3■■□□□ 1
Trim52Q8CDV4 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC21.3■■□□□ 1
Trim52Q8CDV4 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC21.3■■□□□ 1
Trim52Q8CDV4 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Trim52Q8CDV4 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Trim52Q8CDV4 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC21.3■■□□□ 1
Trim52Q8CDV4 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Trim52Q8CDV4 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Trim52Q8CDV4 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Trim52Q8CDV4 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC21.3■■□□□ 1
Trim52Q8CDV4 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Trim52Q8CDV4 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Trim52Q8CDV4 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC21.3■■□□□ 1
Trim52Q8CDV4 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Trim52Q8CDV4 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Trim52Q8CDV4 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Trim52Q8CDV4 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC21.29■■□□□ 1
Trim52Q8CDV4 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Trim52Q8CDV4 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
Trim52Q8CDV4 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Trim52Q8CDV4 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC21.29■■□□□ 1
Trim52Q8CDV4 Mir3081-201ENSMUST00000175305 84 ntBASIC21.29■■□□□ 1
Trim52Q8CDV4 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms