Protein–RNA interactions for Protein: Q8CDE2

Ccin, Calicin, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcinQ8CDE2 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CcinQ8CDE2 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CcinQ8CDE2 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CcinQ8CDE2 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CcinQ8CDE2 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
CcinQ8CDE2 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
CcinQ8CDE2 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CcinQ8CDE2 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CcinQ8CDE2 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CcinQ8CDE2 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.15■□□□□ 0.34
CcinQ8CDE2 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CcinQ8CDE2 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC17.15■□□□□ 0.34
CcinQ8CDE2 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CcinQ8CDE2 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CcinQ8CDE2 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CcinQ8CDE2 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CcinQ8CDE2 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CcinQ8CDE2 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CcinQ8CDE2 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
CcinQ8CDE2 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.14■□□□□ 0.33
CcinQ8CDE2 Idnk-204ENSMUST00000226010 1898 ntBASIC17.14■□□□□ 0.33
CcinQ8CDE2 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
CcinQ8CDE2 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CcinQ8CDE2 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CcinQ8CDE2 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CcinQ8CDE2 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC17.14■□□□□ 0.33
CcinQ8CDE2 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC17.14■□□□□ 0.33
CcinQ8CDE2 Mir8112-201ENSMUST00000184382 131 ntBASIC17.14■□□□□ 0.33
CcinQ8CDE2 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC17.14■□□□□ 0.33
CcinQ8CDE2 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CcinQ8CDE2 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
CcinQ8CDE2 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CcinQ8CDE2 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CcinQ8CDE2 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CcinQ8CDE2 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.13■□□□□ 0.33
CcinQ8CDE2 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CcinQ8CDE2 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC17.13■□□□□ 0.33
CcinQ8CDE2 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CcinQ8CDE2 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CcinQ8CDE2 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CcinQ8CDE2 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.13■□□□□ 0.33
CcinQ8CDE2 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CcinQ8CDE2 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC17.13■□□□□ 0.33
CcinQ8CDE2 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC17.13■□□□□ 0.33
CcinQ8CDE2 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC17.13■□□□□ 0.33
CcinQ8CDE2 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC17.13■□□□□ 0.33
CcinQ8CDE2 Mzt1-203ENSMUST00000227948 952 ntBASIC17.13■□□□□ 0.33
CcinQ8CDE2 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CcinQ8CDE2 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CcinQ8CDE2 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CcinQ8CDE2 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CcinQ8CDE2 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CcinQ8CDE2 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CcinQ8CDE2 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
CcinQ8CDE2 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CcinQ8CDE2 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CcinQ8CDE2 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.12■□□□□ 0.33
CcinQ8CDE2 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CcinQ8CDE2 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CcinQ8CDE2 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
CcinQ8CDE2 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC17.12■□□□□ 0.33
CcinQ8CDE2 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC17.12■□□□□ 0.33
CcinQ8CDE2 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CcinQ8CDE2 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC17.12■□□□□ 0.33
CcinQ8CDE2 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CcinQ8CDE2 Birc2-201ENSMUST00000054878 378 ntBASIC17.12■□□□□ 0.33
CcinQ8CDE2 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CcinQ8CDE2 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CcinQ8CDE2 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CcinQ8CDE2 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CcinQ8CDE2 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
CcinQ8CDE2 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CcinQ8CDE2 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CcinQ8CDE2 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.11■□□□□ 0.33
CcinQ8CDE2 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.11■□□□□ 0.33
CcinQ8CDE2 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CcinQ8CDE2 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CcinQ8CDE2 Gm15794-201ENSMUST00000120182 631 ntBASIC17.11■□□□□ 0.33
CcinQ8CDE2 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CcinQ8CDE2 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CcinQ8CDE2 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CcinQ8CDE2 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CcinQ8CDE2 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CcinQ8CDE2 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CcinQ8CDE2 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CcinQ8CDE2 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.1■□□□□ 0.33
CcinQ8CDE2 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CcinQ8CDE2 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
CcinQ8CDE2 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CcinQ8CDE2 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.1■□□□□ 0.33
CcinQ8CDE2 Fst-202ENSMUST00000223640 2612 ntBASIC17.1■□□□□ 0.33
CcinQ8CDE2 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CcinQ8CDE2 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CcinQ8CDE2 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CcinQ8CDE2 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC17.1■□□□□ 0.33
CcinQ8CDE2 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CcinQ8CDE2 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.1■□□□□ 0.33
CcinQ8CDE2 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CcinQ8CDE2 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CcinQ8CDE2 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms