Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Lrif1Q8CDD9 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.08■□□□□ 0.33
Lrif1Q8CDD9 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lrif1Q8CDD9 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lrif1Q8CDD9 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Lrif1Q8CDD9 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Lrif1Q8CDD9 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Lrif1Q8CDD9 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
Lrif1Q8CDD9 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Lrif1Q8CDD9 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lrif1Q8CDD9 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Lrif1Q8CDD9 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Lrif1Q8CDD9 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.08■□□□□ 0.32
Lrif1Q8CDD9 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lrif1Q8CDD9 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lrif1Q8CDD9 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lrif1Q8CDD9 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Lrif1Q8CDD9 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lrif1Q8CDD9 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lrif1Q8CDD9 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC17.07■□□□□ 0.32
Lrif1Q8CDD9 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lrif1Q8CDD9 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lrif1Q8CDD9 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lrif1Q8CDD9 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC17.07■□□□□ 0.32
Lrif1Q8CDD9 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Lrif1Q8CDD9 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
Lrif1Q8CDD9 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lrif1Q8CDD9 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Lrif1Q8CDD9 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.07■□□□□ 0.32
Lrif1Q8CDD9 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lrif1Q8CDD9 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lrif1Q8CDD9 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lrif1Q8CDD9 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lrif1Q8CDD9 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Lrif1Q8CDD9 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lrif1Q8CDD9 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Lrif1Q8CDD9 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lrif1Q8CDD9 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Lrif1Q8CDD9 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lrif1Q8CDD9 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lrif1Q8CDD9 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lrif1Q8CDD9 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lrif1Q8CDD9 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.06■□□□□ 0.32
Lrif1Q8CDD9 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lrif1Q8CDD9 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Lrif1Q8CDD9 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lrif1Q8CDD9 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Lrif1Q8CDD9 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC17.06■□□□□ 0.32
Lrif1Q8CDD9 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.06■□□□□ 0.32
Lrif1Q8CDD9 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lrif1Q8CDD9 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lrif1Q8CDD9 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lrif1Q8CDD9 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Lrif1Q8CDD9 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lrif1Q8CDD9 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lrif1Q8CDD9 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lrif1Q8CDD9 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lrif1Q8CDD9 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Lrif1Q8CDD9 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lrif1Q8CDD9 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lrif1Q8CDD9 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lrif1Q8CDD9 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lrif1Q8CDD9 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lrif1Q8CDD9 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lrif1Q8CDD9 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lrif1Q8CDD9 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC17.05■□□□□ 0.32
Lrif1Q8CDD9 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lrif1Q8CDD9 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Lrif1Q8CDD9 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lrif1Q8CDD9 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Lrif1Q8CDD9 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lrif1Q8CDD9 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Lrif1Q8CDD9 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.05■□□□□ 0.32
Lrif1Q8CDD9 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lrif1Q8CDD9 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lrif1Q8CDD9 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lrif1Q8CDD9 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lrif1Q8CDD9 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Lrif1Q8CDD9 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lrif1Q8CDD9 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Lrif1Q8CDD9 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lrif1Q8CDD9 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lrif1Q8CDD9 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.04■□□□□ 0.32
Lrif1Q8CDD9 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lrif1Q8CDD9 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lrif1Q8CDD9 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lrif1Q8CDD9 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lrif1Q8CDD9 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC17.04■□□□□ 0.32
Lrif1Q8CDD9 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC17.04■□□□□ 0.32
Lrif1Q8CDD9 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lrif1Q8CDD9 Gm20760-201ENSMUST00000179197 648 ntBASIC17.04■□□□□ 0.32
Lrif1Q8CDD9 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Lrif1Q8CDD9 Gm26524-201ENSMUST00000192339 390 ntBASIC17.04■□□□□ 0.32
Lrif1Q8CDD9 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lrif1Q8CDD9 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lrif1Q8CDD9 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lrif1Q8CDD9 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lrif1Q8CDD9 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lrif1Q8CDD9 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.04■□□□□ 0.32
Lrif1Q8CDD9 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms