Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Shisa4Q8CA71 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Shisa4Q8CA71 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Shisa4Q8CA71 Gm43338-201ENSMUST00000198617 2223 ntBASIC20.11■□□□□ 0.81
Shisa4Q8CA71 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Shisa4Q8CA71 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Shisa4Q8CA71 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Shisa4Q8CA71 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Shisa4Q8CA71 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC20.11■□□□□ 0.81
Shisa4Q8CA71 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC20.11■□□□□ 0.81
Shisa4Q8CA71 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Shisa4Q8CA71 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Shisa4Q8CA71 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Shisa4Q8CA71 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Shisa4Q8CA71 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Shisa4Q8CA71 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Shisa4Q8CA71 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC20.1■□□□□ 0.81
Shisa4Q8CA71 Gm27000-201ENSMUST00000182943 842 ntBASIC20.1■□□□□ 0.81
Shisa4Q8CA71 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC20.1■□□□□ 0.81
Shisa4Q8CA71 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Shisa4Q8CA71 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Shisa4Q8CA71 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Shisa4Q8CA71 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Shisa4Q8CA71 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Shisa4Q8CA71 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
Shisa4Q8CA71 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Shisa4Q8CA71 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Shisa4Q8CA71 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Shisa4Q8CA71 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
Shisa4Q8CA71 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Shisa4Q8CA71 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Shisa4Q8CA71 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Shisa4Q8CA71 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Shisa4Q8CA71 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Shisa4Q8CA71 Gm6659-201ENSMUST00000174752 547 ntBASIC20.09■□□□□ 0.81
Shisa4Q8CA71 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Shisa4Q8CA71 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Shisa4Q8CA71 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Shisa4Q8CA71 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Shisa4Q8CA71 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Shisa4Q8CA71 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Shisa4Q8CA71 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Shisa4Q8CA71 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Shisa4Q8CA71 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Shisa4Q8CA71 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Shisa4Q8CA71 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Shisa4Q8CA71 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Shisa4Q8CA71 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Shisa4Q8CA71 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Shisa4Q8CA71 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Shisa4Q8CA71 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Shisa4Q8CA71 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Shisa4Q8CA71 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Shisa4Q8CA71 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Shisa4Q8CA71 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Shisa4Q8CA71 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC20.07■□□□□ 0.8
Shisa4Q8CA71 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC20.07■□□□□ 0.8
Shisa4Q8CA71 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Shisa4Q8CA71 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Shisa4Q8CA71 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Shisa4Q8CA71 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Shisa4Q8CA71 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Shisa4Q8CA71 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Shisa4Q8CA71 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Shisa4Q8CA71 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Shisa4Q8CA71 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC20.07■□□□□ 0.8
Shisa4Q8CA71 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC20.07■□□□□ 0.8
Shisa4Q8CA71 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Shisa4Q8CA71 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Shisa4Q8CA71 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Shisa4Q8CA71 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Shisa4Q8CA71 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Shisa4Q8CA71 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Shisa4Q8CA71 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Shisa4Q8CA71 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Shisa4Q8CA71 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Shisa4Q8CA71 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Shisa4Q8CA71 Gm6728-201ENSMUST00000178117 1065 ntBASIC20.06■□□□□ 0.8
Shisa4Q8CA71 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC20.06■□□□□ 0.8
Shisa4Q8CA71 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
Shisa4Q8CA71 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Shisa4Q8CA71 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC20.06■□□□□ 0.8
Shisa4Q8CA71 Gm42900-201ENSMUST00000197184 2167 ntBASIC20.05■□□□□ 0.8
Shisa4Q8CA71 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Shisa4Q8CA71 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Shisa4Q8CA71 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Shisa4Q8CA71 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC20.05■□□□□ 0.8
Shisa4Q8CA71 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Shisa4Q8CA71 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC20.05■□□□□ 0.8
Shisa4Q8CA71 Gm5898-201ENSMUST00000121016 2071 ntBASIC20.05■□□□□ 0.8
Shisa4Q8CA71 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Shisa4Q8CA71 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Shisa4Q8CA71 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC20.05■□□□□ 0.8
Shisa4Q8CA71 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Shisa4Q8CA71 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Shisa4Q8CA71 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Shisa4Q8CA71 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Shisa4Q8CA71 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Shisa4Q8CA71 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Shisa4Q8CA71 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms