Protein–RNA interactions for Protein: Q8C878

Uba3, NEDD8-activating enzyme E1 catalytic subunit, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba3Q8C878 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Uba3Q8C878 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Uba3Q8C878 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Uba3Q8C878 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC18.19■□□□□ 0.5
Uba3Q8C878 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC18.19■□□□□ 0.5
Uba3Q8C878 Odf3b-204ENSMUST00000227834 930 ntBASIC18.19■□□□□ 0.5
Uba3Q8C878 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Uba3Q8C878 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Uba3Q8C878 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Uba3Q8C878 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Uba3Q8C878 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Uba3Q8C878 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Uba3Q8C878 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Uba3Q8C878 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Uba3Q8C878 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Uba3Q8C878 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Uba3Q8C878 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Uba3Q8C878 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Uba3Q8C878 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
Uba3Q8C878 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Uba3Q8C878 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Uba3Q8C878 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Uba3Q8C878 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Uba3Q8C878 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC18.18■□□□□ 0.5
Uba3Q8C878 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC18.18■□□□□ 0.5
Uba3Q8C878 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Uba3Q8C878 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Uba3Q8C878 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Uba3Q8C878 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Uba3Q8C878 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Uba3Q8C878 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Uba3Q8C878 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Uba3Q8C878 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
Uba3Q8C878 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Uba3Q8C878 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Uba3Q8C878 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Uba3Q8C878 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Uba3Q8C878 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Uba3Q8C878 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Uba3Q8C878 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Uba3Q8C878 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
Uba3Q8C878 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Uba3Q8C878 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Uba3Q8C878 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Uba3Q8C878 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Uba3Q8C878 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Uba3Q8C878 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Uba3Q8C878 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC18.17■□□□□ 0.5
Uba3Q8C878 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Uba3Q8C878 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC18.17■□□□□ 0.5
Uba3Q8C878 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Uba3Q8C878 AC135963.1-201ENSMUST00000211640 717 ntBASIC18.17■□□□□ 0.5
Uba3Q8C878 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Uba3Q8C878 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Uba3Q8C878 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Uba3Q8C878 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Uba3Q8C878 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Uba3Q8C878 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Uba3Q8C878 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Uba3Q8C878 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
Uba3Q8C878 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Uba3Q8C878 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Uba3Q8C878 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Uba3Q8C878 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Uba3Q8C878 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Uba3Q8C878 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Uba3Q8C878 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Uba3Q8C878 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Uba3Q8C878 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Uba3Q8C878 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC18.16■□□□□ 0.5
Uba3Q8C878 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Uba3Q8C878 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Uba3Q8C878 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Uba3Q8C878 Gm7638-201ENSMUST00000121348 967 ntBASIC18.16■□□□□ 0.5
Uba3Q8C878 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Uba3Q8C878 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Uba3Q8C878 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Uba3Q8C878 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC18.16■□□□□ 0.5
Uba3Q8C878 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Uba3Q8C878 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC18.16■□□□□ 0.5
Uba3Q8C878 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Uba3Q8C878 Gm43808-201ENSMUST00000202534 2065 ntBASIC18.16■□□□□ 0.5
Uba3Q8C878 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Uba3Q8C878 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Uba3Q8C878 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Uba3Q8C878 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC18.15■□□□□ 0.5
Uba3Q8C878 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Uba3Q8C878 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Uba3Q8C878 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Uba3Q8C878 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Uba3Q8C878 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Uba3Q8C878 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
Uba3Q8C878 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Uba3Q8C878 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Uba3Q8C878 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Uba3Q8C878 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC18.14■□□□□ 0.5
Uba3Q8C878 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Uba3Q8C878 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Uba3Q8C878 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Uba3Q8C878 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms