Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Scfd1Q8BRF7 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Scfd1Q8BRF7 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Scfd1Q8BRF7 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Scfd1Q8BRF7 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC19.74■□□□□ 0.75
Scfd1Q8BRF7 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC19.74■□□□□ 0.75
Scfd1Q8BRF7 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Scfd1Q8BRF7 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Scfd1Q8BRF7 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Scfd1Q8BRF7 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Scfd1Q8BRF7 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Scfd1Q8BRF7 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Scfd1Q8BRF7 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Scfd1Q8BRF7 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC19.74■□□□□ 0.75
Scfd1Q8BRF7 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Scfd1Q8BRF7 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Scfd1Q8BRF7 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
Scfd1Q8BRF7 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Scfd1Q8BRF7 AC154471.1-201ENSMUST00000224418 436 ntBASIC19.73■□□□□ 0.75
Scfd1Q8BRF7 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scfd1Q8BRF7 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scfd1Q8BRF7 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scfd1Q8BRF7 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scfd1Q8BRF7 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scfd1Q8BRF7 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scfd1Q8BRF7 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scfd1Q8BRF7 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scfd1Q8BRF7 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scfd1Q8BRF7 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scfd1Q8BRF7 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Scfd1Q8BRF7 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scfd1Q8BRF7 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scfd1Q8BRF7 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Scfd1Q8BRF7 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Scfd1Q8BRF7 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.72■□□□□ 0.75
Scfd1Q8BRF7 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Scfd1Q8BRF7 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Scfd1Q8BRF7 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Scfd1Q8BRF7 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC19.72■□□□□ 0.75
Scfd1Q8BRF7 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC19.72■□□□□ 0.75
Scfd1Q8BRF7 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Scfd1Q8BRF7 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Scfd1Q8BRF7 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Scfd1Q8BRF7 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Scfd1Q8BRF7 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Scfd1Q8BRF7 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Scfd1Q8BRF7 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Scfd1Q8BRF7 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.71■□□□□ 0.75
Scfd1Q8BRF7 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Scfd1Q8BRF7 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Scfd1Q8BRF7 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Scfd1Q8BRF7 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Scfd1Q8BRF7 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Scfd1Q8BRF7 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Scfd1Q8BRF7 Gm14859-201ENSMUST00000117752 357 ntBASIC19.71■□□□□ 0.75
Scfd1Q8BRF7 Gm29518-201ENSMUST00000190858 372 ntBASIC19.71■□□□□ 0.75
Scfd1Q8BRF7 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Scfd1Q8BRF7 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Scfd1Q8BRF7 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Scfd1Q8BRF7 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Scfd1Q8BRF7 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Scfd1Q8BRF7 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Scfd1Q8BRF7 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Scfd1Q8BRF7 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scfd1Q8BRF7 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scfd1Q8BRF7 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scfd1Q8BRF7 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scfd1Q8BRF7 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scfd1Q8BRF7 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scfd1Q8BRF7 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Scfd1Q8BRF7 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Scfd1Q8BRF7 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scfd1Q8BRF7 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scfd1Q8BRF7 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC19.7■□□□□ 0.74
Scfd1Q8BRF7 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scfd1Q8BRF7 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scfd1Q8BRF7 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Scfd1Q8BRF7 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Scfd1Q8BRF7 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scfd1Q8BRF7 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scfd1Q8BRF7 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Scfd1Q8BRF7 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scfd1Q8BRF7 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scfd1Q8BRF7 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scfd1Q8BRF7 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Scfd1Q8BRF7 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Scfd1Q8BRF7 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Scfd1Q8BRF7 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC19.69■□□□□ 0.74
Scfd1Q8BRF7 Gm27000-201ENSMUST00000182943 842 ntBASIC19.69■□□□□ 0.74
Scfd1Q8BRF7 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Scfd1Q8BRF7 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
Scfd1Q8BRF7 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Scfd1Q8BRF7 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Scfd1Q8BRF7 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Scfd1Q8BRF7 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Scfd1Q8BRF7 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Scfd1Q8BRF7 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Scfd1Q8BRF7 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Scfd1Q8BRF7 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Scfd1Q8BRF7 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms