Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Rd3Q8BRE0 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Rd3Q8BRE0 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rd3Q8BRE0 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rd3Q8BRE0 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Rd3Q8BRE0 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Rd3Q8BRE0 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Rd3Q8BRE0 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rd3Q8BRE0 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Rd3Q8BRE0 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rd3Q8BRE0 Idnk-204ENSMUST00000226010 1898 ntBASIC18.33■□□□□ 0.52
Rd3Q8BRE0 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Rd3Q8BRE0 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rd3Q8BRE0 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rd3Q8BRE0 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rd3Q8BRE0 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Rd3Q8BRE0 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rd3Q8BRE0 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
Rd3Q8BRE0 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rd3Q8BRE0 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Rd3Q8BRE0 Gm9013-201ENSMUST00000132939 882 ntBASIC18.32■□□□□ 0.52
Rd3Q8BRE0 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC18.32■□□□□ 0.52
Rd3Q8BRE0 Gm29518-201ENSMUST00000190858 372 ntBASIC18.32■□□□□ 0.52
Rd3Q8BRE0 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rd3Q8BRE0 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rd3Q8BRE0 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rd3Q8BRE0 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Rd3Q8BRE0 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rd3Q8BRE0 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC18.32■□□□□ 0.52
Rd3Q8BRE0 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rd3Q8BRE0 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rd3Q8BRE0 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC18.31■□□□□ 0.52
Rd3Q8BRE0 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rd3Q8BRE0 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rd3Q8BRE0 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Rd3Q8BRE0 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC18.31■□□□□ 0.52
Rd3Q8BRE0 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Rd3Q8BRE0 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rd3Q8BRE0 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rd3Q8BRE0 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rd3Q8BRE0 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.31■□□□□ 0.52
Rd3Q8BRE0 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rd3Q8BRE0 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rd3Q8BRE0 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rd3Q8BRE0 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Rd3Q8BRE0 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Rd3Q8BRE0 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rd3Q8BRE0 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rd3Q8BRE0 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC18.3■□□□□ 0.52
Rd3Q8BRE0 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Rd3Q8BRE0 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rd3Q8BRE0 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rd3Q8BRE0 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC18.3■□□□□ 0.52
Rd3Q8BRE0 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rd3Q8BRE0 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rd3Q8BRE0 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rd3Q8BRE0 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Rd3Q8BRE0 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rd3Q8BRE0 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rd3Q8BRE0 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rd3Q8BRE0 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rd3Q8BRE0 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rd3Q8BRE0 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rd3Q8BRE0 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rd3Q8BRE0 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rd3Q8BRE0 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rd3Q8BRE0 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rd3Q8BRE0 Gm11355-201ENSMUST00000121120 306 ntBASIC18.29■□□□□ 0.52
Rd3Q8BRE0 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
Rd3Q8BRE0 Gm3272-201ENSMUST00000181181 1229 ntBASIC18.29■□□□□ 0.52
Rd3Q8BRE0 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC18.29■□□□□ 0.52
Rd3Q8BRE0 Gm10566-201ENSMUST00000086739 996 ntBASIC18.29■□□□□ 0.52
Rd3Q8BRE0 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Rd3Q8BRE0 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rd3Q8BRE0 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rd3Q8BRE0 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rd3Q8BRE0 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rd3Q8BRE0 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Rd3Q8BRE0 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC18.29■□□□□ 0.52
Rd3Q8BRE0 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.28■□□□□ 0.52
Rd3Q8BRE0 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rd3Q8BRE0 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rd3Q8BRE0 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.28■□□□□ 0.52
Rd3Q8BRE0 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rd3Q8BRE0 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Rd3Q8BRE0 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rd3Q8BRE0 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Rd3Q8BRE0 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rd3Q8BRE0 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rd3Q8BRE0 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC18.28■□□□□ 0.52
Rd3Q8BRE0 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rd3Q8BRE0 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rd3Q8BRE0 Gm17808-201ENSMUST00000200859 894 ntBASIC18.28■□□□□ 0.52
Rd3Q8BRE0 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rd3Q8BRE0 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rd3Q8BRE0 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rd3Q8BRE0 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rd3Q8BRE0 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rd3Q8BRE0 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rd3Q8BRE0 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms