Protein–RNA interactions for Protein: Q8BR65

Suds3, Sin3 histone deacetylase corepressor complex component SDS3, mousemouse

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Suds3Q8BR65 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Suds3Q8BR65 Idnk-204ENSMUST00000226010 1898 ntBASIC17.71■□□□□ 0.43
Suds3Q8BR65 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Suds3Q8BR65 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.71■□□□□ 0.42
Suds3Q8BR65 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Suds3Q8BR65 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Suds3Q8BR65 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Suds3Q8BR65 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Suds3Q8BR65 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Suds3Q8BR65 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Suds3Q8BR65 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Suds3Q8BR65 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
Suds3Q8BR65 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Suds3Q8BR65 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Suds3Q8BR65 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.7■□□□□ 0.42
Suds3Q8BR65 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.7■□□□□ 0.42
Suds3Q8BR65 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Suds3Q8BR65 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.7■□□□□ 0.42
Suds3Q8BR65 Arhgef33-211ENSMUST00000225658 473 ntBASIC17.7■□□□□ 0.42
Suds3Q8BR65 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Suds3Q8BR65 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Suds3Q8BR65 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Suds3Q8BR65 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Suds3Q8BR65 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Suds3Q8BR65 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.7■□□□□ 0.42
Suds3Q8BR65 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Suds3Q8BR65 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Suds3Q8BR65 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Suds3Q8BR65 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Suds3Q8BR65 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Suds3Q8BR65 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Suds3Q8BR65 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Suds3Q8BR65 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Suds3Q8BR65 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.69■□□□□ 0.42
Suds3Q8BR65 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Suds3Q8BR65 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Suds3Q8BR65 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.69■□□□□ 0.42
Suds3Q8BR65 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Suds3Q8BR65 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.69■□□□□ 0.42
Suds3Q8BR65 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Suds3Q8BR65 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Suds3Q8BR65 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Suds3Q8BR65 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.69■□□□□ 0.42
Suds3Q8BR65 Alkbh1-212ENSMUST00000185301 408 ntBASIC17.69■□□□□ 0.42
Suds3Q8BR65 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.69■□□□□ 0.42
Suds3Q8BR65 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC17.69■□□□□ 0.42
Suds3Q8BR65 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.69■□□□□ 0.42
Suds3Q8BR65 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
Suds3Q8BR65 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Suds3Q8BR65 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Suds3Q8BR65 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Suds3Q8BR65 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Suds3Q8BR65 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Suds3Q8BR65 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Suds3Q8BR65 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Suds3Q8BR65 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Suds3Q8BR65 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Suds3Q8BR65 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Suds3Q8BR65 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Suds3Q8BR65 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Suds3Q8BR65 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Suds3Q8BR65 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Suds3Q8BR65 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Suds3Q8BR65 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Suds3Q8BR65 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.68■□□□□ 0.42
Suds3Q8BR65 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Suds3Q8BR65 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Suds3Q8BR65 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Suds3Q8BR65 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Suds3Q8BR65 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.68■□□□□ 0.42
Suds3Q8BR65 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.68■□□□□ 0.42
Suds3Q8BR65 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Suds3Q8BR65 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC17.68■□□□□ 0.42
Suds3Q8BR65 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Suds3Q8BR65 Gm10698-201ENSMUST00000182663 604 ntBASIC17.68■□□□□ 0.42
Suds3Q8BR65 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Suds3Q8BR65 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Suds3Q8BR65 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.68■□□□□ 0.42
Suds3Q8BR65 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Suds3Q8BR65 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Suds3Q8BR65 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Suds3Q8BR65 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Suds3Q8BR65 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Suds3Q8BR65 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Suds3Q8BR65 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Suds3Q8BR65 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.68■□□□□ 0.42
Suds3Q8BR65 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Suds3Q8BR65 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Suds3Q8BR65 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Suds3Q8BR65 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Suds3Q8BR65 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Suds3Q8BR65 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Suds3Q8BR65 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Suds3Q8BR65 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Suds3Q8BR65 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Suds3Q8BR65 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.67■□□□□ 0.42
Suds3Q8BR65 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC17.67■□□□□ 0.42
Suds3Q8BR65 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Suds3Q8BR65 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.67■□□□□ 0.42
Suds3Q8BR65 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms