Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC16.76■□□□□ 0.27
Cpsf4Q8BQZ5 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC16.76■□□□□ 0.27
Cpsf4Q8BQZ5 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cpsf4Q8BQZ5 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cpsf4Q8BQZ5 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cpsf4Q8BQZ5 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cpsf4Q8BQZ5 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cpsf4Q8BQZ5 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cpsf4Q8BQZ5 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cpsf4Q8BQZ5 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cpsf4Q8BQZ5 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cpsf4Q8BQZ5 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Cpsf4Q8BQZ5 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Cpsf4Q8BQZ5 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cpsf4Q8BQZ5 Gm45560-201ENSMUST00000211492 1472 ntBASIC16.75■□□□□ 0.27
Cpsf4Q8BQZ5 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cpsf4Q8BQZ5 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cpsf4Q8BQZ5 Gm15378-201ENSMUST00000121894 207 ntBASIC16.75■□□□□ 0.27
Cpsf4Q8BQZ5 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC16.75■□□□□ 0.27
Cpsf4Q8BQZ5 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Cpsf4Q8BQZ5 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cpsf4Q8BQZ5 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cpsf4Q8BQZ5 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cpsf4Q8BQZ5 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cpsf4Q8BQZ5 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Cpsf4Q8BQZ5 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cpsf4Q8BQZ5 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cpsf4Q8BQZ5 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cpsf4Q8BQZ5 Gm15635-204ENSMUST00000208024 2539 ntBASIC16.74■□□□□ 0.27
Cpsf4Q8BQZ5 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cpsf4Q8BQZ5 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cpsf4Q8BQZ5 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Cpsf4Q8BQZ5 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cpsf4Q8BQZ5 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cpsf4Q8BQZ5 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cpsf4Q8BQZ5 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Cpsf4Q8BQZ5 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cpsf4Q8BQZ5 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cpsf4Q8BQZ5 Gm10138-203ENSMUST00000206952 366 ntBASIC16.74■□□□□ 0.27
Cpsf4Q8BQZ5 AC153881.1-201ENSMUST00000214448 284 ntBASIC16.74■□□□□ 0.27
Cpsf4Q8BQZ5 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cpsf4Q8BQZ5 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cpsf4Q8BQZ5 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cpsf4Q8BQZ5 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cpsf4Q8BQZ5 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cpsf4Q8BQZ5 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cpsf4Q8BQZ5 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cpsf4Q8BQZ5 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cpsf4Q8BQZ5 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
Cpsf4Q8BQZ5 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cpsf4Q8BQZ5 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cpsf4Q8BQZ5 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cpsf4Q8BQZ5 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cpsf4Q8BQZ5 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
Cpsf4Q8BQZ5 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Cpsf4Q8BQZ5 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC16.73■□□□□ 0.27
Cpsf4Q8BQZ5 AC121598.2-201ENSMUST00000228376 2325 ntBASIC16.73■□□□□ 0.27
Cpsf4Q8BQZ5 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cpsf4Q8BQZ5 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
Cpsf4Q8BQZ5 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cpsf4Q8BQZ5 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cpsf4Q8BQZ5 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cpsf4Q8BQZ5 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cpsf4Q8BQZ5 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cpsf4Q8BQZ5 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cpsf4Q8BQZ5 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cpsf4Q8BQZ5 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
Cpsf4Q8BQZ5 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC16.73■□□□□ 0.27
Cpsf4Q8BQZ5 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cpsf4Q8BQZ5 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cpsf4Q8BQZ5 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cpsf4Q8BQZ5 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cpsf4Q8BQZ5 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cpsf4Q8BQZ5 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cpsf4Q8BQZ5 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cpsf4Q8BQZ5 Gm5898-201ENSMUST00000121016 2071 ntBASIC16.73■□□□□ 0.27
Cpsf4Q8BQZ5 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cpsf4Q8BQZ5 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cpsf4Q8BQZ5 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cpsf4Q8BQZ5 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cpsf4Q8BQZ5 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cpsf4Q8BQZ5 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cpsf4Q8BQZ5 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cpsf4Q8BQZ5 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cpsf4Q8BQZ5 Gm15375-201ENSMUST00000119510 849 ntBASIC16.72■□□□□ 0.27
Cpsf4Q8BQZ5 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cpsf4Q8BQZ5 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cpsf4Q8BQZ5 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Cpsf4Q8BQZ5 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Cpsf4Q8BQZ5 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cpsf4Q8BQZ5 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cpsf4Q8BQZ5 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cpsf4Q8BQZ5 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.72■□□□□ 0.27
Cpsf4Q8BQZ5 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cpsf4Q8BQZ5 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cpsf4Q8BQZ5 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cpsf4Q8BQZ5 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cpsf4Q8BQZ5 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cpsf4Q8BQZ5 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC16.71■□□□□ 0.27
Cpsf4Q8BQZ5 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16.71■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms