Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Cdhr3Q8BL00 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Cdhr3Q8BL00 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC15.08■□□□□ 0
Cdhr3Q8BL00 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC15.08■□□□□ 0
Cdhr3Q8BL00 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Cdhr3Q8BL00 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cdhr3Q8BL00 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Cdhr3Q8BL00 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Cdhr3Q8BL00 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cdhr3Q8BL00 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cdhr3Q8BL00 Gm45412-201ENSMUST00000210217 2275 ntBASIC15.08■□□□□ 0
Cdhr3Q8BL00 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cdhr3Q8BL00 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC15.08■□□□□ 0
Cdhr3Q8BL00 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Cdhr3Q8BL00 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cdhr3Q8BL00 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Cdhr3Q8BL00 Gm10654-201ENSMUST00000098653 1633 ntBASIC15.07■□□□□ 0
Cdhr3Q8BL00 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cdhr3Q8BL00 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC15.07■□□□□ 0
Cdhr3Q8BL00 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cdhr3Q8BL00 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cdhr3Q8BL00 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cdhr3Q8BL00 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cdhr3Q8BL00 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cdhr3Q8BL00 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC15.07■□□□□ 0
Cdhr3Q8BL00 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC15.07■□□□□ 0
Cdhr3Q8BL00 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Cdhr3Q8BL00 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cdhr3Q8BL00 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC15.07■□□□□ 0
Cdhr3Q8BL00 Gm11841-201ENSMUST00000117060 1963 ntBASIC15.07■□□□□ 0
Cdhr3Q8BL00 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cdhr3Q8BL00 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC15.07■□□□□ 0
Cdhr3Q8BL00 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cdhr3Q8BL00 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Cdhr3Q8BL00 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Cdhr3Q8BL00 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cdhr3Q8BL00 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cdhr3Q8BL00 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cdhr3Q8BL00 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Cdhr3Q8BL00 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Cdhr3Q8BL00 Mir5133-201ENSMUST00000174955 77 ntBASIC15.06■□□□□ 0
Cdhr3Q8BL00 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cdhr3Q8BL00 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC15.06■□□□□ 0
Cdhr3Q8BL00 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
Cdhr3Q8BL00 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cdhr3Q8BL00 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Cdhr3Q8BL00 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cdhr3Q8BL00 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cdhr3Q8BL00 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cdhr3Q8BL00 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
Cdhr3Q8BL00 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cdhr3Q8BL00 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cdhr3Q8BL00 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cdhr3Q8BL00 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cdhr3Q8BL00 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Cdhr3Q8BL00 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cdhr3Q8BL00 Gm19721-201ENSMUST00000195284 1764 ntBASIC15.06■□□□□ 0
Cdhr3Q8BL00 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Cdhr3Q8BL00 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Cdhr3Q8BL00 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Cdhr3Q8BL00 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Cdhr3Q8BL00 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Cdhr3Q8BL00 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Cdhr3Q8BL00 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cdhr3Q8BL00 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC15.05■□□□□ -0
Cdhr3Q8BL00 Gm11643-201ENSMUST00000119578 864 ntBASIC15.05■□□□□ -0
Cdhr3Q8BL00 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC15.05■□□□□ -0
Cdhr3Q8BL00 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC15.05■□□□□ -0
Cdhr3Q8BL00 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC15.05■□□□□ -0
Cdhr3Q8BL00 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Cdhr3Q8BL00 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Cdhr3Q8BL00 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cdhr3Q8BL00 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
Cdhr3Q8BL00 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cdhr3Q8BL00 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
Cdhr3Q8BL00 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC15.05■□□□□ -0
Cdhr3Q8BL00 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Cdhr3Q8BL00 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Cdhr3Q8BL00 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cdhr3Q8BL00 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Cdhr3Q8BL00 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cdhr3Q8BL00 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cdhr3Q8BL00 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cdhr3Q8BL00 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cdhr3Q8BL00 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC15.04■□□□□ -0
Cdhr3Q8BL00 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cdhr3Q8BL00 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Cdhr3Q8BL00 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cdhr3Q8BL00 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC15.04■□□□□ -0
Cdhr3Q8BL00 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cdhr3Q8BL00 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC15.04■□□□□ -0
Cdhr3Q8BL00 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC15.04■□□□□ -0
Cdhr3Q8BL00 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Cdhr3Q8BL00 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cdhr3Q8BL00 Mir6349-201ENSMUST00000184059 97 ntBASIC15.04■□□□□ -0
Cdhr3Q8BL00 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC15.04■□□□□ -0
Cdhr3Q8BL00 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Cdhr3Q8BL00 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC15.04■□□□□ -0
Cdhr3Q8BL00 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cdhr3Q8BL00 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms