Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf38Q8BI21 Gm15847-201ENSMUST00000121417 1065 ntBASIC16.66■□□□□ 0.26
Rnf38Q8BI21 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC16.66■□□□□ 0.26
Rnf38Q8BI21 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC16.66■□□□□ 0.26
Rnf38Q8BI21 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf38Q8BI21 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf38Q8BI21 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC16.66■□□□□ 0.26
Rnf38Q8BI21 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Rnf38Q8BI21 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf38Q8BI21 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf38Q8BI21 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf38Q8BI21 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
Rnf38Q8BI21 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC16.66■□□□□ 0.26
Rnf38Q8BI21 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf38Q8BI21 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf38Q8BI21 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Rnf38Q8BI21 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.65■□□□□ 0.26
Rnf38Q8BI21 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf38Q8BI21 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf38Q8BI21 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf38Q8BI21 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf38Q8BI21 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf38Q8BI21 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Rnf38Q8BI21 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf38Q8BI21 Gm29241-201ENSMUST00000189260 1096 ntBASIC16.65■□□□□ 0.26
Rnf38Q8BI21 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf38Q8BI21 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf38Q8BI21 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf38Q8BI21 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf38Q8BI21 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Rnf38Q8BI21 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf38Q8BI21 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf38Q8BI21 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.65■□□□□ 0.26
Rnf38Q8BI21 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Rnf38Q8BI21 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Rnf38Q8BI21 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Rnf38Q8BI21 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rnf38Q8BI21 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rnf38Q8BI21 AC122335.2-201ENSMUST00000213901 6181 ntBASIC16.64■□□□□ 0.25
Rnf38Q8BI21 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC16.64■□□□□ 0.25
Rnf38Q8BI21 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rnf38Q8BI21 Gm29257-201ENSMUST00000186115 639 ntBASIC16.64■□□□□ 0.25
Rnf38Q8BI21 Gm44672-201ENSMUST00000206944 1098 ntBASIC16.64■□□□□ 0.25
Rnf38Q8BI21 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rnf38Q8BI21 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rnf38Q8BI21 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rnf38Q8BI21 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rnf38Q8BI21 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rnf38Q8BI21 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rnf38Q8BI21 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rnf38Q8BI21 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rnf38Q8BI21 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rnf38Q8BI21 Gm43859-201ENSMUST00000200075 1412 ntBASIC16.63■□□□□ 0.25
Rnf38Q8BI21 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Rnf38Q8BI21 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rnf38Q8BI21 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rnf38Q8BI21 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rnf38Q8BI21 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rnf38Q8BI21 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rnf38Q8BI21 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rnf38Q8BI21 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rnf38Q8BI21 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rnf38Q8BI21 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rnf38Q8BI21 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rnf38Q8BI21 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC16.63■□□□□ 0.25
Rnf38Q8BI21 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC16.63■□□□□ 0.25
Rnf38Q8BI21 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rnf38Q8BI21 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rnf38Q8BI21 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rnf38Q8BI21 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Rnf38Q8BI21 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Rnf38Q8BI21 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rnf38Q8BI21 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rnf38Q8BI21 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rnf38Q8BI21 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rnf38Q8BI21 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rnf38Q8BI21 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rnf38Q8BI21 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC16.62■□□□□ 0.25
Rnf38Q8BI21 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Rnf38Q8BI21 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rnf38Q8BI21 AC122769.4-201ENSMUST00000228166 901 ntBASIC16.62■□□□□ 0.25
Rnf38Q8BI21 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rnf38Q8BI21 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
Rnf38Q8BI21 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rnf38Q8BI21 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rnf38Q8BI21 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rnf38Q8BI21 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Rnf38Q8BI21 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rnf38Q8BI21 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rnf38Q8BI21 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rnf38Q8BI21 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rnf38Q8BI21 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rnf38Q8BI21 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rnf38Q8BI21 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rnf38Q8BI21 Gm10418-201ENSMUST00000100943 576 ntBASIC16.61■□□□□ 0.25
Rnf38Q8BI21 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC16.61■□□□□ 0.25
Rnf38Q8BI21 Gm4968-201ENSMUST00000071458 858 ntBASIC16.61■□□□□ 0.25
Rnf38Q8BI21 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rnf38Q8BI21 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rnf38Q8BI21 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms