Protein–RNA interactions for Protein: Q8BGX0

Trim23, E3 ubiquitin-protein ligase TRIM23, mousemouse

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23Q8BGX0 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim23Q8BGX0 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC16.65■□□□□ 0.26
Trim23Q8BGX0 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trim23Q8BGX0 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.64■□□□□ 0.26
Trim23Q8BGX0 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim23Q8BGX0 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC16.64■□□□□ 0.25
Trim23Q8BGX0 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC16.64■□□□□ 0.25
Trim23Q8BGX0 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim23Q8BGX0 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim23Q8BGX0 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
Trim23Q8BGX0 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC16.64■□□□□ 0.25
Trim23Q8BGX0 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC16.64■□□□□ 0.25
Trim23Q8BGX0 AC153881.2-201ENSMUST00000214877 204 ntBASIC16.64■□□□□ 0.25
Trim23Q8BGX0 AC120002.2-201ENSMUST00000220205 773 ntBASIC16.64■□□□□ 0.25
Trim23Q8BGX0 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim23Q8BGX0 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim23Q8BGX0 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim23Q8BGX0 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim23Q8BGX0 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim23Q8BGX0 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim23Q8BGX0 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
Trim23Q8BGX0 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trim23Q8BGX0 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim23Q8BGX0 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim23Q8BGX0 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim23Q8BGX0 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim23Q8BGX0 Fcho2-208ENSMUST00000224992 2964 ntBASIC16.63■□□□□ 0.25
Trim23Q8BGX0 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Trim23Q8BGX0 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim23Q8BGX0 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trim23Q8BGX0 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Trim23Q8BGX0 Mir7071-201ENSMUST00000184847 69 ntBASIC16.63■□□□□ 0.25
Trim23Q8BGX0 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trim23Q8BGX0 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim23Q8BGX0 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim23Q8BGX0 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trim23Q8BGX0 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
Trim23Q8BGX0 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim23Q8BGX0 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trim23Q8BGX0 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim23Q8BGX0 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim23Q8BGX0 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim23Q8BGX0 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC16.63■□□□□ 0.25
Trim23Q8BGX0 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim23Q8BGX0 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim23Q8BGX0 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC16.62■□□□□ 0.25
Trim23Q8BGX0 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim23Q8BGX0 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim23Q8BGX0 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Trim23Q8BGX0 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Trim23Q8BGX0 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Trim23Q8BGX0 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
Trim23Q8BGX0 Gm29994-201ENSMUST00000195495 1193 ntBASIC16.62■□□□□ 0.25
Trim23Q8BGX0 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim23Q8BGX0 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim23Q8BGX0 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim23Q8BGX0 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trim23Q8BGX0 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim23Q8BGX0 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim23Q8BGX0 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim23Q8BGX0 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Trim23Q8BGX0 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trim23Q8BGX0 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim23Q8BGX0 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim23Q8BGX0 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim23Q8BGX0 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Trim23Q8BGX0 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trim23Q8BGX0 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim23Q8BGX0 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim23Q8BGX0 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Trim23Q8BGX0 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Trim23Q8BGX0 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Trim23Q8BGX0 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC16.61■□□□□ 0.25
Trim23Q8BGX0 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim23Q8BGX0 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Trim23Q8BGX0 Gm4217-201ENSMUST00000182243 1002 ntBASIC16.61■□□□□ 0.25
Trim23Q8BGX0 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Trim23Q8BGX0 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Trim23Q8BGX0 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Trim23Q8BGX0 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim23Q8BGX0 Gm9987-201ENSMUST00000069768 567 ntBASIC16.61■□□□□ 0.25
Trim23Q8BGX0 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim23Q8BGX0 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Trim23Q8BGX0 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC16.61■□□□□ 0.25
Trim23Q8BGX0 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim23Q8BGX0 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim23Q8BGX0 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim23Q8BGX0 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim23Q8BGX0 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Trim23Q8BGX0 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim23Q8BGX0 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim23Q8BGX0 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
Trim23Q8BGX0 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trim23Q8BGX0 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Trim23Q8BGX0 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trim23Q8BGX0 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC16.6■□□□□ 0.25
Trim23Q8BGX0 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC16.6■□□□□ 0.25
Trim23Q8BGX0 Gm7889-201ENSMUST00000185591 958 ntBASIC16.6■□□□□ 0.25
Trim23Q8BGX0 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC16.6■□□□□ 0.25
Trim23Q8BGX0 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms