Protein–RNA interactions for Protein: Q8BGR5

Fam53b, Protein FAM53B, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam53bQ8BGR5 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Fam53bQ8BGR5 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Fam53bQ8BGR5 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Fam53bQ8BGR5 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Fam53bQ8BGR5 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Fam53bQ8BGR5 AC122335.2-201ENSMUST00000213901 6181 ntBASIC15.21■□□□□ 0.02
Fam53bQ8BGR5 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Fam53bQ8BGR5 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Fam53bQ8BGR5 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Fam53bQ8BGR5 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Fam53bQ8BGR5 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
Fam53bQ8BGR5 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC15.2■□□□□ 0.02
Fam53bQ8BGR5 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Fam53bQ8BGR5 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC15.2■□□□□ 0.02
Fam53bQ8BGR5 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC15.2■□□□□ 0.02
Fam53bQ8BGR5 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC15.2■□□□□ 0.02
Fam53bQ8BGR5 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Fam53bQ8BGR5 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Fam53bQ8BGR5 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Fam53bQ8BGR5 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Fam53bQ8BGR5 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Fam53bQ8BGR5 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Fam53bQ8BGR5 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Fam53bQ8BGR5 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Fam53bQ8BGR5 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Fam53bQ8BGR5 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Fam53bQ8BGR5 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Fam53bQ8BGR5 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Fam53bQ8BGR5 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Fam53bQ8BGR5 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Fam53bQ8BGR5 Gm12085-201ENSMUST00000119263 940 ntBASIC15.19■□□□□ 0.02
Fam53bQ8BGR5 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Fam53bQ8BGR5 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Fam53bQ8BGR5 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Fam53bQ8BGR5 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Fam53bQ8BGR5 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Fam53bQ8BGR5 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Fam53bQ8BGR5 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Fam53bQ8BGR5 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Fam53bQ8BGR5 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Fam53bQ8BGR5 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Fam53bQ8BGR5 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Fam53bQ8BGR5 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Fam53bQ8BGR5 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Fam53bQ8BGR5 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC15.18■□□□□ 0.02
Fam53bQ8BGR5 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Fam53bQ8BGR5 Gm7292-201ENSMUST00000194706 2527 ntBASIC15.18■□□□□ 0.02
Fam53bQ8BGR5 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Fam53bQ8BGR5 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Fam53bQ8BGR5 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
Fam53bQ8BGR5 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Fam53bQ8BGR5 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Fam53bQ8BGR5 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Fam53bQ8BGR5 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Fam53bQ8BGR5 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Fam53bQ8BGR5 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Fam53bQ8BGR5 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Fam53bQ8BGR5 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Fam53bQ8BGR5 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Fam53bQ8BGR5 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
Fam53bQ8BGR5 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Fam53bQ8BGR5 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Fam53bQ8BGR5 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Fam53bQ8BGR5 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Fam53bQ8BGR5 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Fam53bQ8BGR5 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Fam53bQ8BGR5 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Fam53bQ8BGR5 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Fam53bQ8BGR5 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Fam53bQ8BGR5 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Fam53bQ8BGR5 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Fam53bQ8BGR5 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Fam53bQ8BGR5 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
Fam53bQ8BGR5 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC15.17■□□□□ 0.02
Fam53bQ8BGR5 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC15.17■□□□□ 0.02
Fam53bQ8BGR5 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC15.17■□□□□ 0.02
Fam53bQ8BGR5 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Fam53bQ8BGR5 Gm16042-201ENSMUST00000204813 1247 ntBASIC15.17■□□□□ 0.02
Fam53bQ8BGR5 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC15.17■□□□□ 0.02
Fam53bQ8BGR5 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Fam53bQ8BGR5 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Fam53bQ8BGR5 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Fam53bQ8BGR5 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Fam53bQ8BGR5 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Fam53bQ8BGR5 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Fam53bQ8BGR5 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Fam53bQ8BGR5 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Fam53bQ8BGR5 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Fam53bQ8BGR5 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Fam53bQ8BGR5 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Fam53bQ8BGR5 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Fam53bQ8BGR5 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Fam53bQ8BGR5 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Fam53bQ8BGR5 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Fam53bQ8BGR5 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Fam53bQ8BGR5 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Fam53bQ8BGR5 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC15.16■□□□□ 0.02
Fam53bQ8BGR5 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Fam53bQ8BGR5 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Fam53bQ8BGR5 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms