Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Ubp1Q811S7 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ubp1Q811S7 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ubp1Q811S7 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ubp1Q811S7 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17■□□□□ 0.31
Ubp1Q811S7 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17■□□□□ 0.31
Ubp1Q811S7 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ubp1Q811S7 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ubp1Q811S7 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ubp1Q811S7 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Ubp1Q811S7 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ubp1Q811S7 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ubp1Q811S7 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ubp1Q811S7 Gm43272-201ENSMUST00000200599 1584 ntBASIC17■□□□□ 0.31
Ubp1Q811S7 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ubp1Q811S7 Arhgef4-208ENSMUST00000211073 171 ntBASIC17■□□□□ 0.31
Ubp1Q811S7 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17■□□□□ 0.31
Ubp1Q811S7 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ubp1Q811S7 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ubp1Q811S7 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ubp1Q811S7 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC17■□□□□ 0.31
Ubp1Q811S7 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ubp1Q811S7 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ubp1Q811S7 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Ubp1Q811S7 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17■□□□□ 0.31
Ubp1Q811S7 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Ubp1Q811S7 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Ubp1Q811S7 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ubp1Q811S7 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
Ubp1Q811S7 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Ubp1Q811S7 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ubp1Q811S7 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC16.99■□□□□ 0.31
Ubp1Q811S7 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Ubp1Q811S7 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Ubp1Q811S7 Timm23-208ENSMUST00000226683 750 ntBASIC16.99■□□□□ 0.31
Ubp1Q811S7 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ubp1Q811S7 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Ubp1Q811S7 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Ubp1Q811S7 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Ubp1Q811S7 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ubp1Q811S7 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ubp1Q811S7 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ubp1Q811S7 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ubp1Q811S7 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ubp1Q811S7 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ubp1Q811S7 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ubp1Q811S7 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ubp1Q811S7 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ubp1Q811S7 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ubp1Q811S7 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ubp1Q811S7 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ubp1Q811S7 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Ubp1Q811S7 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ubp1Q811S7 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
Ubp1Q811S7 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ubp1Q811S7 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ubp1Q811S7 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
Ubp1Q811S7 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC16.98■□□□□ 0.31
Ubp1Q811S7 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Ubp1Q811S7 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ubp1Q811S7 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ubp1Q811S7 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ubp1Q811S7 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ubp1Q811S7 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC16.98■□□□□ 0.31
Ubp1Q811S7 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ubp1Q811S7 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ubp1Q811S7 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ubp1Q811S7 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ubp1Q811S7 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ubp1Q811S7 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ubp1Q811S7 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
Ubp1Q811S7 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC16.97■□□□□ 0.31
Ubp1Q811S7 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ubp1Q811S7 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ubp1Q811S7 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ubp1Q811S7 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Ubp1Q811S7 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Ubp1Q811S7 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Ubp1Q811S7 Gm24841-201ENSMUST00000158676 357 ntBASIC16.97■□□□□ 0.31
Ubp1Q811S7 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Ubp1Q811S7 Mir6982-201ENSMUST00000184354 68 ntBASIC16.97■□□□□ 0.31
Ubp1Q811S7 Gm37055-201ENSMUST00000191866 133 ntBASIC16.97■□□□□ 0.31
Ubp1Q811S7 Gm9484-201ENSMUST00000195892 1159 ntBASIC16.97■□□□□ 0.31
Ubp1Q811S7 Gm5417-201ENSMUST00000079706 384 ntBASIC16.97■□□□□ 0.31
Ubp1Q811S7 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ubp1Q811S7 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ubp1Q811S7 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ubp1Q811S7 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Ubp1Q811S7 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ubp1Q811S7 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Ubp1Q811S7 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ubp1Q811S7 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ubp1Q811S7 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
Ubp1Q811S7 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ubp1Q811S7 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Ubp1Q811S7 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ubp1Q811S7 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Ubp1Q811S7 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ubp1Q811S7 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ubp1Q811S7 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC16.96■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms