Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Trnp1Q80ZI1 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Trnp1Q80ZI1 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Trnp1Q80ZI1 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
Trnp1Q80ZI1 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trnp1Q80ZI1 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Trnp1Q80ZI1 Gm12644-201ENSMUST00000119935 606 ntBASIC19.48■□□□□ 0.71
Trnp1Q80ZI1 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC19.48■□□□□ 0.71
Trnp1Q80ZI1 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC19.48■□□□□ 0.71
Trnp1Q80ZI1 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC19.48■□□□□ 0.71
Trnp1Q80ZI1 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC19.48■□□□□ 0.71
Trnp1Q80ZI1 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trnp1Q80ZI1 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trnp1Q80ZI1 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Trnp1Q80ZI1 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trnp1Q80ZI1 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Trnp1Q80ZI1 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Trnp1Q80ZI1 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Trnp1Q80ZI1 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trnp1Q80ZI1 Golph3-205ENSMUST00000228671 2842 ntBASIC19.47■□□□□ 0.71
Trnp1Q80ZI1 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trnp1Q80ZI1 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trnp1Q80ZI1 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Trnp1Q80ZI1 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trnp1Q80ZI1 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trnp1Q80ZI1 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC19.47■□□□□ 0.71
Trnp1Q80ZI1 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trnp1Q80ZI1 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trnp1Q80ZI1 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trnp1Q80ZI1 Gm27000-201ENSMUST00000182943 842 ntBASIC19.47■□□□□ 0.71
Trnp1Q80ZI1 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Trnp1Q80ZI1 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trnp1Q80ZI1 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trnp1Q80ZI1 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trnp1Q80ZI1 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trnp1Q80ZI1 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trnp1Q80ZI1 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trnp1Q80ZI1 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trnp1Q80ZI1 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Trnp1Q80ZI1 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trnp1Q80ZI1 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trnp1Q80ZI1 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
Trnp1Q80ZI1 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trnp1Q80ZI1 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trnp1Q80ZI1 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trnp1Q80ZI1 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC19.46■□□□□ 0.71
Trnp1Q80ZI1 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trnp1Q80ZI1 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trnp1Q80ZI1 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Trnp1Q80ZI1 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trnp1Q80ZI1 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trnp1Q80ZI1 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trnp1Q80ZI1 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trnp1Q80ZI1 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Trnp1Q80ZI1 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Trnp1Q80ZI1 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trnp1Q80ZI1 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trnp1Q80ZI1 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trnp1Q80ZI1 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trnp1Q80ZI1 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC19.45■□□□□ 0.7
Trnp1Q80ZI1 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trnp1Q80ZI1 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Trnp1Q80ZI1 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Trnp1Q80ZI1 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Trnp1Q80ZI1 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trnp1Q80ZI1 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trnp1Q80ZI1 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trnp1Q80ZI1 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trnp1Q80ZI1 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trnp1Q80ZI1 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trnp1Q80ZI1 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trnp1Q80ZI1 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Trnp1Q80ZI1 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trnp1Q80ZI1 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trnp1Q80ZI1 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trnp1Q80ZI1 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trnp1Q80ZI1 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trnp1Q80ZI1 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trnp1Q80ZI1 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC19.44■□□□□ 0.7
Trnp1Q80ZI1 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
Trnp1Q80ZI1 Gm1818-201ENSMUST00000169406 1184 ntBASIC19.44■□□□□ 0.7
Trnp1Q80ZI1 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trnp1Q80ZI1 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trnp1Q80ZI1 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Trnp1Q80ZI1 Vti1a-206ENSMUST00000225529 1244 ntBASIC19.44■□□□□ 0.7
Trnp1Q80ZI1 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC19.44■□□□□ 0.7
Trnp1Q80ZI1 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trnp1Q80ZI1 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Trnp1Q80ZI1 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trnp1Q80ZI1 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trnp1Q80ZI1 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trnp1Q80ZI1 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trnp1Q80ZI1 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trnp1Q80ZI1 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Trnp1Q80ZI1 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.43■□□□□ 0.7
Trnp1Q80ZI1 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trnp1Q80ZI1 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trnp1Q80ZI1 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trnp1Q80ZI1 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trnp1Q80ZI1 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms