Protein–RNA interactions for Protein: Q80XU3

Nucks1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, mousemouse

Known RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nucks1Q80XU3 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Nucks1Q80XU3 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nucks1Q80XU3 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nucks1Q80XU3 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Nucks1Q80XU3 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nucks1Q80XU3 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nucks1Q80XU3 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Nucks1Q80XU3 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nucks1Q80XU3 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Nucks1Q80XU3 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
Nucks1Q80XU3 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nucks1Q80XU3 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nucks1Q80XU3 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Nucks1Q80XU3 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nucks1Q80XU3 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nucks1Q80XU3 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nucks1Q80XU3 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nucks1Q80XU3 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
Nucks1Q80XU3 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC18.47■□□□□ 0.55
Nucks1Q80XU3 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC18.47■□□□□ 0.55
Nucks1Q80XU3 Gm27275-201ENSMUST00000184318 272 ntBASIC18.47■□□□□ 0.55
Nucks1Q80XU3 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Nucks1Q80XU3 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nucks1Q80XU3 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nucks1Q80XU3 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC18.47■□□□□ 0.55
Nucks1Q80XU3 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nucks1Q80XU3 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Nucks1Q80XU3 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Nucks1Q80XU3 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Nucks1Q80XU3 Gm19721-201ENSMUST00000195284 1764 ntBASIC18.46■□□□□ 0.55
Nucks1Q80XU3 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nucks1Q80XU3 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Nucks1Q80XU3 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nucks1Q80XU3 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Nucks1Q80XU3 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC18.46■□□□□ 0.55
Nucks1Q80XU3 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.46■□□□□ 0.55
Nucks1Q80XU3 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Nucks1Q80XU3 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Nucks1Q80XU3 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nucks1Q80XU3 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC18.46■□□□□ 0.55
Nucks1Q80XU3 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nucks1Q80XU3 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nucks1Q80XU3 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nucks1Q80XU3 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nucks1Q80XU3 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Nucks1Q80XU3 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Nucks1Q80XU3 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC18.46■□□□□ 0.55
Nucks1Q80XU3 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nucks1Q80XU3 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.54
Nucks1Q80XU3 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Nucks1Q80XU3 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nucks1Q80XU3 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nucks1Q80XU3 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Nucks1Q80XU3 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nucks1Q80XU3 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nucks1Q80XU3 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nucks1Q80XU3 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nucks1Q80XU3 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nucks1Q80XU3 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nucks1Q80XU3 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nucks1Q80XU3 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Nucks1Q80XU3 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nucks1Q80XU3 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Nucks1Q80XU3 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC18.45■□□□□ 0.54
Nucks1Q80XU3 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Nucks1Q80XU3 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nucks1Q80XU3 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nucks1Q80XU3 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC18.44■□□□□ 0.54
Nucks1Q80XU3 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nucks1Q80XU3 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nucks1Q80XU3 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Nucks1Q80XU3 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Nucks1Q80XU3 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nucks1Q80XU3 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC18.44■□□□□ 0.54
Nucks1Q80XU3 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nucks1Q80XU3 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nucks1Q80XU3 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC18.44■□□□□ 0.54
Nucks1Q80XU3 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC18.44■□□□□ 0.54
Nucks1Q80XU3 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC18.44■□□□□ 0.54
Nucks1Q80XU3 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Nucks1Q80XU3 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Nucks1Q80XU3 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nucks1Q80XU3 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nucks1Q80XU3 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nucks1Q80XU3 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Nucks1Q80XU3 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Nucks1Q80XU3 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nucks1Q80XU3 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Nucks1Q80XU3 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC18.43■□□□□ 0.54
Nucks1Q80XU3 AC166341.7-201ENSMUST00000221698 126 ntBASIC18.43■□□□□ 0.54
Nucks1Q80XU3 Gm18025-201ENSMUST00000221733 862 ntBASIC18.43■□□□□ 0.54
Nucks1Q80XU3 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Nucks1Q80XU3 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nucks1Q80XU3 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nucks1Q80XU3 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Nucks1Q80XU3 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nucks1Q80XU3 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC18.43■□□□□ 0.54
Nucks1Q80XU3 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Nucks1Q80XU3 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Nucks1Q80XU3 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms