Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC19.04■□□□□ 0.64
Usp6nlQ80XC3 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC19.04■□□□□ 0.64
Usp6nlQ80XC3 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Usp6nlQ80XC3 Gm45328-201ENSMUST00000210942 917 ntBASIC19.04■□□□□ 0.64
Usp6nlQ80XC3 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Usp6nlQ80XC3 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Usp6nlQ80XC3 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Usp6nlQ80XC3 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Usp6nlQ80XC3 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Usp6nlQ80XC3 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Usp6nlQ80XC3 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Usp6nlQ80XC3 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Usp6nlQ80XC3 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.03■□□□□ 0.64
Usp6nlQ80XC3 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
Usp6nlQ80XC3 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Usp6nlQ80XC3 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Usp6nlQ80XC3 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Usp6nlQ80XC3 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Usp6nlQ80XC3 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Usp6nlQ80XC3 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Usp6nlQ80XC3 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Usp6nlQ80XC3 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Usp6nlQ80XC3 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Usp6nlQ80XC3 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Usp6nlQ80XC3 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Usp6nlQ80XC3 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Usp6nlQ80XC3 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Usp6nlQ80XC3 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Usp6nlQ80XC3 Gm19721-201ENSMUST00000195284 1764 ntBASIC19.02■□□□□ 0.64
Usp6nlQ80XC3 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Usp6nlQ80XC3 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC19.02■□□□□ 0.64
Usp6nlQ80XC3 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
Usp6nlQ80XC3 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Usp6nlQ80XC3 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Usp6nlQ80XC3 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Usp6nlQ80XC3 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Usp6nlQ80XC3 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Usp6nlQ80XC3 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC19.01■□□□□ 0.63
Usp6nlQ80XC3 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
Usp6nlQ80XC3 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Usp6nlQ80XC3 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Usp6nlQ80XC3 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Usp6nlQ80XC3 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Usp6nlQ80XC3 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Usp6nlQ80XC3 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Usp6nlQ80XC3 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC19.01■□□□□ 0.63
Usp6nlQ80XC3 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Usp6nlQ80XC3 Gm18115-201ENSMUST00000221209 621 ntBASIC19.01■□□□□ 0.63
Usp6nlQ80XC3 AC133598.3-202ENSMUST00000224219 531 ntBASIC19.01■□□□□ 0.63
Usp6nlQ80XC3 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Usp6nlQ80XC3 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Usp6nlQ80XC3 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Usp6nlQ80XC3 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Usp6nlQ80XC3 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Usp6nlQ80XC3 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Usp6nlQ80XC3 Gm45141-201ENSMUST00000206502 1888 ntBASIC19.01■□□□□ 0.63
Usp6nlQ80XC3 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Usp6nlQ80XC3 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Usp6nlQ80XC3 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Usp6nlQ80XC3 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Usp6nlQ80XC3 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Usp6nlQ80XC3 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC19■□□□□ 0.63
Usp6nlQ80XC3 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Usp6nlQ80XC3 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC19■□□□□ 0.63
Usp6nlQ80XC3 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19■□□□□ 0.63
Usp6nlQ80XC3 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Usp6nlQ80XC3 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC19■□□□□ 0.63
Usp6nlQ80XC3 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Usp6nlQ80XC3 Olfr129-201ENSMUST00000122318 993 ntBASIC19■□□□□ 0.63
Usp6nlQ80XC3 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Usp6nlQ80XC3 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC19■□□□□ 0.63
Usp6nlQ80XC3 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Usp6nlQ80XC3 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Usp6nlQ80XC3 Rarb-207ENSMUST00000225921 2756 ntBASIC19■□□□□ 0.63
Usp6nlQ80XC3 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Usp6nlQ80XC3 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC19■□□□□ 0.63
Usp6nlQ80XC3 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Usp6nlQ80XC3 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
Usp6nlQ80XC3 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
Usp6nlQ80XC3 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Usp6nlQ80XC3 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.99■□□□□ 0.63
Usp6nlQ80XC3 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Usp6nlQ80XC3 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Usp6nlQ80XC3 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC18.99■□□□□ 0.63
Usp6nlQ80XC3 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC18.99■□□□□ 0.63
Usp6nlQ80XC3 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC18.99■□□□□ 0.63
Usp6nlQ80XC3 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Usp6nlQ80XC3 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Usp6nlQ80XC3 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC18.99■□□□□ 0.63
Usp6nlQ80XC3 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Usp6nlQ80XC3 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Usp6nlQ80XC3 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Usp6nlQ80XC3 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Usp6nlQ80XC3 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Usp6nlQ80XC3 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Usp6nlQ80XC3 Cxcl14-202ENSMUST00000224801 1467 ntBASIC18.98■□□□□ 0.63
Usp6nlQ80XC3 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Usp6nlQ80XC3 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Usp6nlQ80XC3 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.98■□□□□ 0.63
Usp6nlQ80XC3 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC18.98■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms