Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC17.32■□□□□ 0.36
Usp8Q80U87 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp8Q80U87 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Usp8Q80U87 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp8Q80U87 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp8Q80U87 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp8Q80U87 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp8Q80U87 Gm15847-201ENSMUST00000121417 1065 ntBASIC17.32■□□□□ 0.36
Usp8Q80U87 Gm44672-201ENSMUST00000206944 1098 ntBASIC17.32■□□□□ 0.36
Usp8Q80U87 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp8Q80U87 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp8Q80U87 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp8Q80U87 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp8Q80U87 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp8Q80U87 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp8Q80U87 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp8Q80U87 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Usp8Q80U87 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.32■□□□□ 0.36
Usp8Q80U87 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.32■□□□□ 0.36
Usp8Q80U87 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp8Q80U87 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp8Q80U87 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp8Q80U87 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.31■□□□□ 0.36
Usp8Q80U87 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Usp8Q80U87 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp8Q80U87 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp8Q80U87 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp8Q80U87 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp8Q80U87 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Usp8Q80U87 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Usp8Q80U87 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp8Q80U87 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC17.31■□□□□ 0.36
Usp8Q80U87 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Usp8Q80U87 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC17.31■□□□□ 0.36
Usp8Q80U87 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Usp8Q80U87 Gm10602-201ENSMUST00000098239 609 ntBASIC17.31■□□□□ 0.36
Usp8Q80U87 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp8Q80U87 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp8Q80U87 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Usp8Q80U87 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.31■□□□□ 0.36
Usp8Q80U87 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Usp8Q80U87 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp8Q80U87 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp8Q80U87 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp8Q80U87 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.3■□□□□ 0.36
Usp8Q80U87 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Usp8Q80U87 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Usp8Q80U87 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Usp8Q80U87 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp8Q80U87 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp8Q80U87 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp8Q80U87 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp8Q80U87 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Usp8Q80U87 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp8Q80U87 Gm11927-201ENSMUST00000118472 759 ntBASIC17.3■□□□□ 0.36
Usp8Q80U87 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Usp8Q80U87 Gm2559-201ENSMUST00000201323 363 ntBASIC17.3■□□□□ 0.36
Usp8Q80U87 Gm29791-202ENSMUST00000207888 369 ntBASIC17.3■□□□□ 0.36
Usp8Q80U87 Gm4968-201ENSMUST00000071458 858 ntBASIC17.3■□□□□ 0.36
Usp8Q80U87 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp8Q80U87 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp8Q80U87 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp8Q80U87 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp8Q80U87 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp8Q80U87 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Usp8Q80U87 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp8Q80U87 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Usp8Q80U87 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp8Q80U87 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp8Q80U87 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Usp8Q80U87 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp8Q80U87 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp8Q80U87 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp8Q80U87 Mir2861-201ENSMUST00000175539 82 ntBASIC17.29■□□□□ 0.36
Usp8Q80U87 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp8Q80U87 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp8Q80U87 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp8Q80U87 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp8Q80U87 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC17.29■□□□□ 0.36
Usp8Q80U87 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp8Q80U87 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Usp8Q80U87 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp8Q80U87 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp8Q80U87 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp8Q80U87 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp8Q80U87 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp8Q80U87 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Usp8Q80U87 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp8Q80U87 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Usp8Q80U87 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp8Q80U87 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp8Q80U87 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp8Q80U87 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp8Q80U87 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Usp8Q80U87 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC17.28■□□□□ 0.36
Usp8Q80U87 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp8Q80U87 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp8Q80U87 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp8Q80U87 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp8Q80U87 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 79.2 ms