Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Prpf38bQ80SY5 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC18■□□□□ 0.47
Prpf38bQ80SY5 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC18■□□□□ 0.47
Prpf38bQ80SY5 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Prpf38bQ80SY5 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
Prpf38bQ80SY5 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Prpf38bQ80SY5 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Prpf38bQ80SY5 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
Prpf38bQ80SY5 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Prpf38bQ80SY5 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC17.99■□□□□ 0.47
Prpf38bQ80SY5 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Prpf38bQ80SY5 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Prpf38bQ80SY5 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Prpf38bQ80SY5 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Prpf38bQ80SY5 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Prpf38bQ80SY5 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Prpf38bQ80SY5 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Prpf38bQ80SY5 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Prpf38bQ80SY5 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Prpf38bQ80SY5 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Prpf38bQ80SY5 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Prpf38bQ80SY5 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Prpf38bQ80SY5 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.98■□□□□ 0.47
Prpf38bQ80SY5 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Prpf38bQ80SY5 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC17.98■□□□□ 0.47
Prpf38bQ80SY5 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Prpf38bQ80SY5 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC17.98■□□□□ 0.47
Prpf38bQ80SY5 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Prpf38bQ80SY5 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Prpf38bQ80SY5 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Prpf38bQ80SY5 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Prpf38bQ80SY5 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Prpf38bQ80SY5 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Prpf38bQ80SY5 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Prpf38bQ80SY5 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Prpf38bQ80SY5 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Prpf38bQ80SY5 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.98■□□□□ 0.47
Prpf38bQ80SY5 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Prpf38bQ80SY5 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Prpf38bQ80SY5 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Prpf38bQ80SY5 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Prpf38bQ80SY5 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Prpf38bQ80SY5 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Prpf38bQ80SY5 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Prpf38bQ80SY5 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Prpf38bQ80SY5 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC17.97■□□□□ 0.47
Prpf38bQ80SY5 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
Prpf38bQ80SY5 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
Prpf38bQ80SY5 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
Prpf38bQ80SY5 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.97■□□□□ 0.47
Prpf38bQ80SY5 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Prpf38bQ80SY5 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Prpf38bQ80SY5 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Prpf38bQ80SY5 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Prpf38bQ80SY5 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Prpf38bQ80SY5 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Prpf38bQ80SY5 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Prpf38bQ80SY5 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Prpf38bQ80SY5 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Prpf38bQ80SY5 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Prpf38bQ80SY5 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Prpf38bQ80SY5 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC17.96■□□□□ 0.47
Prpf38bQ80SY5 Gm5587-201ENSMUST00000206270 674 ntBASIC17.96■□□□□ 0.47
Prpf38bQ80SY5 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Prpf38bQ80SY5 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Prpf38bQ80SY5 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.96■□□□□ 0.47
Prpf38bQ80SY5 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Prpf38bQ80SY5 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Prpf38bQ80SY5 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
Prpf38bQ80SY5 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Prpf38bQ80SY5 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Prpf38bQ80SY5 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Prpf38bQ80SY5 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Prpf38bQ80SY5 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Prpf38bQ80SY5 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Prpf38bQ80SY5 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.95■□□□□ 0.46
Prpf38bQ80SY5 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Prpf38bQ80SY5 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Prpf38bQ80SY5 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Prpf38bQ80SY5 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Prpf38bQ80SY5 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Prpf38bQ80SY5 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Prpf38bQ80SY5 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Prpf38bQ80SY5 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC17.95■□□□□ 0.46
Prpf38bQ80SY5 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Prpf38bQ80SY5 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
Prpf38bQ80SY5 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Prpf38bQ80SY5 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Prpf38bQ80SY5 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.95■□□□□ 0.46
Prpf38bQ80SY5 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Prpf38bQ80SY5 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Prpf38bQ80SY5 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Prpf38bQ80SY5 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Prpf38bQ80SY5 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Prpf38bQ80SY5 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.95■□□□□ 0.46
Prpf38bQ80SY5 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Prpf38bQ80SY5 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Prpf38bQ80SY5 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Prpf38bQ80SY5 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Prpf38bQ80SY5 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms