Protein–RNA interactions for Protein: Q70E20

Sned1, Sushi, nidogen and EGF-like domain-containing protein 1, mousemouse

Predictions only

Length 1,403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sned1Q70E20 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sned1Q70E20 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sned1Q70E20 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Sned1Q70E20 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Sned1Q70E20 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sned1Q70E20 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Sned1Q70E20 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sned1Q70E20 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Sned1Q70E20 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC20.9■□□□□ 0.94
Sned1Q70E20 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC20.9■□□□□ 0.94
Sned1Q70E20 Gm6736-201ENSMUST00000166583 948 ntBASIC20.9■□□□□ 0.94
Sned1Q70E20 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC20.9■□□□□ 0.94
Sned1Q70E20 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC20.9■□□□□ 0.94
Sned1Q70E20 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC20.9■□□□□ 0.94
Sned1Q70E20 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sned1Q70E20 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Sned1Q70E20 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sned1Q70E20 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
Sned1Q70E20 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sned1Q70E20 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Sned1Q70E20 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sned1Q70E20 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.9■□□□□ 0.94
Sned1Q70E20 Gm5784-201ENSMUST00000179344 2478 ntBASIC20.9■□□□□ 0.94
Sned1Q70E20 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sned1Q70E20 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Sned1Q70E20 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Sned1Q70E20 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Sned1Q70E20 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Sned1Q70E20 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC20.89■□□□□ 0.94
Sned1Q70E20 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Sned1Q70E20 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
Sned1Q70E20 Gm18856-201ENSMUST00000178096 1374 ntBASIC20.89■□□□□ 0.93
Sned1Q70E20 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Sned1Q70E20 AC154527.4-201ENSMUST00000224364 1667 ntBASIC20.89■□□□□ 0.93
Sned1Q70E20 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Sned1Q70E20 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sned1Q70E20 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sned1Q70E20 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Sned1Q70E20 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sned1Q70E20 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
Sned1Q70E20 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sned1Q70E20 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sned1Q70E20 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC20.87■□□□□ 0.93
Sned1Q70E20 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC20.87■□□□□ 0.93
Sned1Q70E20 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC20.87■□□□□ 0.93
Sned1Q70E20 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sned1Q70E20 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sned1Q70E20 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC20.87■□□□□ 0.93
Sned1Q70E20 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Sned1Q70E20 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sned1Q70E20 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC20.87■□□□□ 0.93
Sned1Q70E20 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC20.87■□□□□ 0.93
Sned1Q70E20 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Sned1Q70E20 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC20.87■□□□□ 0.93
Sned1Q70E20 Gm29707-201ENSMUST00000196325 491 ntBASIC20.87■□□□□ 0.93
Sned1Q70E20 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC20.87■□□□□ 0.93
Sned1Q70E20 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC20.87■□□□□ 0.93
Sned1Q70E20 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sned1Q70E20 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Sned1Q70E20 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sned1Q70E20 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Sned1Q70E20 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Sned1Q70E20 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sned1Q70E20 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sned1Q70E20 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sned1Q70E20 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sned1Q70E20 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Sned1Q70E20 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sned1Q70E20 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sned1Q70E20 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC20.86■□□□□ 0.93
Sned1Q70E20 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sned1Q70E20 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Sned1Q70E20 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC20.86■□□□□ 0.93
Sned1Q70E20 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sned1Q70E20 Gm18421-201ENSMUST00000204122 625 ntBASIC20.86■□□□□ 0.93
Sned1Q70E20 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC20.86■□□□□ 0.93
Sned1Q70E20 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sned1Q70E20 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Sned1Q70E20 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sned1Q70E20 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sned1Q70E20 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sned1Q70E20 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sned1Q70E20 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sned1Q70E20 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Sned1Q70E20 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sned1Q70E20 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Sned1Q70E20 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Sned1Q70E20 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sned1Q70E20 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sned1Q70E20 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Sned1Q70E20 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC20.84■□□□□ 0.93
Sned1Q70E20 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sned1Q70E20 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sned1Q70E20 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Sned1Q70E20 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sned1Q70E20 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Sned1Q70E20 Gm2756-201ENSMUST00000195851 400 ntBASIC20.84■□□□□ 0.93
Sned1Q70E20 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC20.84■□□□□ 0.93
Sned1Q70E20 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC20.84■□□□□ 0.93
Sned1Q70E20 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms