Protein–RNA interactions for Protein: Q6ZPZ3

Zc3h4, Zinc finger CCCH domain-containing protein 4, mousemouse

Known RBP Predictions only

Length 1,304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h4Q6ZPZ3 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Zc3h4Q6ZPZ3 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Zc3h4Q6ZPZ3 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Zc3h4Q6ZPZ3 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Zc3h4Q6ZPZ3 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Zc3h4Q6ZPZ3 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Zc3h4Q6ZPZ3 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Zc3h4Q6ZPZ3 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Zc3h4Q6ZPZ3 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Zc3h4Q6ZPZ3 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC19.25■□□□□ 0.67
Zc3h4Q6ZPZ3 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Zc3h4Q6ZPZ3 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.25■□□□□ 0.67
Zc3h4Q6ZPZ3 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Zc3h4Q6ZPZ3 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC19.25■□□□□ 0.67
Zc3h4Q6ZPZ3 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Zc3h4Q6ZPZ3 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Zc3h4Q6ZPZ3 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Zc3h4Q6ZPZ3 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Zc3h4Q6ZPZ3 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.25■□□□□ 0.67
Zc3h4Q6ZPZ3 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Zc3h4Q6ZPZ3 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Zc3h4Q6ZPZ3 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Zc3h4Q6ZPZ3 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Zc3h4Q6ZPZ3 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Zc3h4Q6ZPZ3 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC19.25■□□□□ 0.67
Zc3h4Q6ZPZ3 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC19.25■□□□□ 0.67
Zc3h4Q6ZPZ3 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC19.25■□□□□ 0.67
Zc3h4Q6ZPZ3 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Zc3h4Q6ZPZ3 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Zc3h4Q6ZPZ3 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Zc3h4Q6ZPZ3 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Zc3h4Q6ZPZ3 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Zc3h4Q6ZPZ3 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Zc3h4Q6ZPZ3 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.24■□□□□ 0.67
Zc3h4Q6ZPZ3 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Zc3h4Q6ZPZ3 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Zc3h4Q6ZPZ3 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Zc3h4Q6ZPZ3 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Zc3h4Q6ZPZ3 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Zc3h4Q6ZPZ3 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Zc3h4Q6ZPZ3 Gm1401-201ENSMUST00000122048 772 ntBASIC19.24■□□□□ 0.67
Zc3h4Q6ZPZ3 Gm10052-201ENSMUST00000168019 960 ntBASIC19.24■□□□□ 0.67
Zc3h4Q6ZPZ3 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Zc3h4Q6ZPZ3 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC19.24■□□□□ 0.67
Zc3h4Q6ZPZ3 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC19.24■□□□□ 0.67
Zc3h4Q6ZPZ3 Gm2651-201ENSMUST00000203560 838 ntBASIC19.24■□□□□ 0.67
Zc3h4Q6ZPZ3 Gm7729-201ENSMUST00000050143 801 ntBASIC19.24■□□□□ 0.67
Zc3h4Q6ZPZ3 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Zc3h4Q6ZPZ3 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Zc3h4Q6ZPZ3 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Zc3h4Q6ZPZ3 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Zc3h4Q6ZPZ3 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Zc3h4Q6ZPZ3 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Zc3h4Q6ZPZ3 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Zc3h4Q6ZPZ3 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Zc3h4Q6ZPZ3 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Zc3h4Q6ZPZ3 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Zc3h4Q6ZPZ3 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Zc3h4Q6ZPZ3 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Zc3h4Q6ZPZ3 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
Zc3h4Q6ZPZ3 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Zc3h4Q6ZPZ3 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Zc3h4Q6ZPZ3 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC19.23■□□□□ 0.67
Zc3h4Q6ZPZ3 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC19.23■□□□□ 0.67
Zc3h4Q6ZPZ3 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC19.23■□□□□ 0.67
Zc3h4Q6ZPZ3 Vti1a-206ENSMUST00000225529 1244 ntBASIC19.23■□□□□ 0.67
Zc3h4Q6ZPZ3 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Zc3h4Q6ZPZ3 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Zc3h4Q6ZPZ3 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Zc3h4Q6ZPZ3 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Zc3h4Q6ZPZ3 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Zc3h4Q6ZPZ3 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Zc3h4Q6ZPZ3 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Zc3h4Q6ZPZ3 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Zc3h4Q6ZPZ3 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Zc3h4Q6ZPZ3 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Zc3h4Q6ZPZ3 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Zc3h4Q6ZPZ3 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
Zc3h4Q6ZPZ3 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Zc3h4Q6ZPZ3 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Zc3h4Q6ZPZ3 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC19.22■□□□□ 0.67
Zc3h4Q6ZPZ3 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Zc3h4Q6ZPZ3 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC19.22■□□□□ 0.67
Zc3h4Q6ZPZ3 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Zc3h4Q6ZPZ3 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Zc3h4Q6ZPZ3 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC19.21■□□□□ 0.67
Zc3h4Q6ZPZ3 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Zc3h4Q6ZPZ3 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Zc3h4Q6ZPZ3 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Zc3h4Q6ZPZ3 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Zc3h4Q6ZPZ3 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Zc3h4Q6ZPZ3 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Zc3h4Q6ZPZ3 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Zc3h4Q6ZPZ3 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Zc3h4Q6ZPZ3 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Zc3h4Q6ZPZ3 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC19.21■□□□□ 0.67
Zc3h4Q6ZPZ3 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Zc3h4Q6ZPZ3 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC19.21■□□□□ 0.67
Zc3h4Q6ZPZ3 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC19.21■□□□□ 0.67
Zc3h4Q6ZPZ3 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms