Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ddx55Q6ZPL9 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.66■□□□□ 0.74
Ddx55Q6ZPL9 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ddx55Q6ZPL9 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC19.65■□□□□ 0.74
Ddx55Q6ZPL9 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ddx55Q6ZPL9 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ddx55Q6ZPL9 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ddx55Q6ZPL9 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ddx55Q6ZPL9 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ddx55Q6ZPL9 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ddx55Q6ZPL9 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC19.65■□□□□ 0.74
Ddx55Q6ZPL9 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ddx55Q6ZPL9 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ddx55Q6ZPL9 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ddx55Q6ZPL9 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ddx55Q6ZPL9 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC19.64■□□□□ 0.73
Ddx55Q6ZPL9 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ddx55Q6ZPL9 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC19.64■□□□□ 0.73
Ddx55Q6ZPL9 AC125350.1-201ENSMUST00000225115 903 ntBASIC19.64■□□□□ 0.73
Ddx55Q6ZPL9 Gm5867-201ENSMUST00000063197 592 ntBASIC19.64■□□□□ 0.73
Ddx55Q6ZPL9 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ddx55Q6ZPL9 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ddx55Q6ZPL9 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ddx55Q6ZPL9 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ddx55Q6ZPL9 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ddx55Q6ZPL9 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Ddx55Q6ZPL9 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ddx55Q6ZPL9 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Ddx55Q6ZPL9 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ddx55Q6ZPL9 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Ddx55Q6ZPL9 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Ddx55Q6ZPL9 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ddx55Q6ZPL9 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ddx55Q6ZPL9 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Ddx55Q6ZPL9 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC19.63■□□□□ 0.73
Ddx55Q6ZPL9 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ddx55Q6ZPL9 Gm13186-201ENSMUST00000118031 316 ntBASIC19.63■□□□□ 0.73
Ddx55Q6ZPL9 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC19.63■□□□□ 0.73
Ddx55Q6ZPL9 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Ddx55Q6ZPL9 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC19.63■□□□□ 0.73
Ddx55Q6ZPL9 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Ddx55Q6ZPL9 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC19.63■□□□□ 0.73
Ddx55Q6ZPL9 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC19.63■□□□□ 0.73
Ddx55Q6ZPL9 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Ddx55Q6ZPL9 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ddx55Q6ZPL9 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ddx55Q6ZPL9 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ddx55Q6ZPL9 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ddx55Q6ZPL9 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ddx55Q6ZPL9 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ddx55Q6ZPL9 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ddx55Q6ZPL9 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Ddx55Q6ZPL9 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ddx55Q6ZPL9 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC19.62■□□□□ 0.73
Ddx55Q6ZPL9 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ddx55Q6ZPL9 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC19.62■□□□□ 0.73
Ddx55Q6ZPL9 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ddx55Q6ZPL9 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ddx55Q6ZPL9 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ddx55Q6ZPL9 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ddx55Q6ZPL9 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ddx55Q6ZPL9 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ddx55Q6ZPL9 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ddx55Q6ZPL9 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ddx55Q6ZPL9 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ddx55Q6ZPL9 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ddx55Q6ZPL9 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ddx55Q6ZPL9 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ddx55Q6ZPL9 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ddx55Q6ZPL9 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ddx55Q6ZPL9 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ddx55Q6ZPL9 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ddx55Q6ZPL9 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC19.61■□□□□ 0.73
Ddx55Q6ZPL9 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Ddx55Q6ZPL9 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ddx55Q6ZPL9 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ddx55Q6ZPL9 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ddx55Q6ZPL9 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Ddx55Q6ZPL9 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ddx55Q6ZPL9 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ddx55Q6ZPL9 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ddx55Q6ZPL9 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ddx55Q6ZPL9 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ddx55Q6ZPL9 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ddx55Q6ZPL9 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ddx55Q6ZPL9 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Ddx55Q6ZPL9 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ddx55Q6ZPL9 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ddx55Q6ZPL9 Gm15372-201ENSMUST00000120729 834 ntBASIC19.6■□□□□ 0.73
Ddx55Q6ZPL9 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC19.6■□□□□ 0.73
Ddx55Q6ZPL9 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ddx55Q6ZPL9 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ddx55Q6ZPL9 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ddx55Q6ZPL9 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ddx55Q6ZPL9 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC19.6■□□□□ 0.73
Ddx55Q6ZPL9 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ddx55Q6ZPL9 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Ddx55Q6ZPL9 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
Ddx55Q6ZPL9 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC19.59■□□□□ 0.73
Ddx55Q6ZPL9 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC19.59■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms