Protein–RNA interactions for Protein: Q6T3U4

Npc1l1, Niemann-Pick C1-like protein 1, mousemouse

Predictions only

Length 1,333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1l1Q6T3U4 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Npc1l1Q6T3U4 Gm14859-201ENSMUST00000117752 357 ntBASIC20.69■□□□□ 0.9
Npc1l1Q6T3U4 Gm9103-201ENSMUST00000119371 405 ntBASIC20.69■□□□□ 0.9
Npc1l1Q6T3U4 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC20.69■□□□□ 0.9
Npc1l1Q6T3U4 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC20.69■□□□□ 0.9
Npc1l1Q6T3U4 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC20.69■□□□□ 0.9
Npc1l1Q6T3U4 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Npc1l1Q6T3U4 AC120002.2-201ENSMUST00000220205 773 ntBASIC20.69■□□□□ 0.9
Npc1l1Q6T3U4 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Npc1l1Q6T3U4 AC154471.1-201ENSMUST00000224418 436 ntBASIC20.69■□□□□ 0.9
Npc1l1Q6T3U4 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Npc1l1Q6T3U4 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Npc1l1Q6T3U4 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Npc1l1Q6T3U4 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC20.68■□□□□ 0.9
Npc1l1Q6T3U4 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Npc1l1Q6T3U4 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Npc1l1Q6T3U4 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Npc1l1Q6T3U4 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Npc1l1Q6T3U4 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Npc1l1Q6T3U4 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Npc1l1Q6T3U4 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Npc1l1Q6T3U4 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Npc1l1Q6T3U4 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Npc1l1Q6T3U4 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Npc1l1Q6T3U4 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Npc1l1Q6T3U4 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Npc1l1Q6T3U4 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC20.68■□□□□ 0.9
Npc1l1Q6T3U4 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Npc1l1Q6T3U4 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Npc1l1Q6T3U4 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Npc1l1Q6T3U4 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Npc1l1Q6T3U4 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Npc1l1Q6T3U4 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Npc1l1Q6T3U4 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Npc1l1Q6T3U4 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Npc1l1Q6T3U4 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Npc1l1Q6T3U4 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Npc1l1Q6T3U4 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Npc1l1Q6T3U4 Gm7370-201ENSMUST00000219471 767 ntBASIC20.67■□□□□ 0.9
Npc1l1Q6T3U4 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Npc1l1Q6T3U4 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Npc1l1Q6T3U4 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Npc1l1Q6T3U4 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Npc1l1Q6T3U4 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Npc1l1Q6T3U4 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Npc1l1Q6T3U4 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Npc1l1Q6T3U4 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Npc1l1Q6T3U4 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Npc1l1Q6T3U4 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Npc1l1Q6T3U4 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Npc1l1Q6T3U4 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Npc1l1Q6T3U4 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Npc1l1Q6T3U4 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Npc1l1Q6T3U4 Gm37811-201ENSMUST00000192416 2601 ntBASIC20.65■□□□□ 0.9
Npc1l1Q6T3U4 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Npc1l1Q6T3U4 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Npc1l1Q6T3U4 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Npc1l1Q6T3U4 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Npc1l1Q6T3U4 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Npc1l1Q6T3U4 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Npc1l1Q6T3U4 Mir1668-201ENSMUST00000184114 107 ntBASIC20.65■□□□□ 0.9
Npc1l1Q6T3U4 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Npc1l1Q6T3U4 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
Npc1l1Q6T3U4 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Npc1l1Q6T3U4 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Npc1l1Q6T3U4 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Npc1l1Q6T3U4 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC20.65■□□□□ 0.9
Npc1l1Q6T3U4 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Npc1l1Q6T3U4 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Npc1l1Q6T3U4 Gm7284-201ENSMUST00000131667 944 ntBASIC20.64■□□□□ 0.89
Npc1l1Q6T3U4 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Npc1l1Q6T3U4 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Npc1l1Q6T3U4 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Npc1l1Q6T3U4 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
Npc1l1Q6T3U4 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC20.64■□□□□ 0.89
Npc1l1Q6T3U4 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Npc1l1Q6T3U4 Gm8258-201ENSMUST00000055593 1449 ntBASIC20.64■□□□□ 0.89
Npc1l1Q6T3U4 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC20.64■□□□□ 0.89
Npc1l1Q6T3U4 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Npc1l1Q6T3U4 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Npc1l1Q6T3U4 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC20.63■□□□□ 0.89
Npc1l1Q6T3U4 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Npc1l1Q6T3U4 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Npc1l1Q6T3U4 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Npc1l1Q6T3U4 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Npc1l1Q6T3U4 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC20.63■□□□□ 0.89
Npc1l1Q6T3U4 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Npc1l1Q6T3U4 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Npc1l1Q6T3U4 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Npc1l1Q6T3U4 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Npc1l1Q6T3U4 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Npc1l1Q6T3U4 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Npc1l1Q6T3U4 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Npc1l1Q6T3U4 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Npc1l1Q6T3U4 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Npc1l1Q6T3U4 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Npc1l1Q6T3U4 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Npc1l1Q6T3U4 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Npc1l1Q6T3U4 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Npc1l1Q6T3U4 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms