Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC15.17■□□□□ 0.02
Snrnp40Q6PE01 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Snrnp40Q6PE01 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Snrnp40Q6PE01 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Snrnp40Q6PE01 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Snrnp40Q6PE01 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Snrnp40Q6PE01 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC15.17■□□□□ 0.02
Snrnp40Q6PE01 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Snrnp40Q6PE01 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Snrnp40Q6PE01 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Snrnp40Q6PE01 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Snrnp40Q6PE01 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Snrnp40Q6PE01 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC15.16■□□□□ 0.02
Snrnp40Q6PE01 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Snrnp40Q6PE01 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
Snrnp40Q6PE01 Gm12895-201ENSMUST00000122214 226 ntBASIC15.16■□□□□ 0.02
Snrnp40Q6PE01 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Snrnp40Q6PE01 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Snrnp40Q6PE01 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Snrnp40Q6PE01 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Snrnp40Q6PE01 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Snrnp40Q6PE01 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Snrnp40Q6PE01 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Snrnp40Q6PE01 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Snrnp40Q6PE01 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Snrnp40Q6PE01 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Snrnp40Q6PE01 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Snrnp40Q6PE01 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Snrnp40Q6PE01 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Snrnp40Q6PE01 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Snrnp40Q6PE01 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Snrnp40Q6PE01 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Snrnp40Q6PE01 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Snrnp40Q6PE01 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Snrnp40Q6PE01 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Snrnp40Q6PE01 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Snrnp40Q6PE01 Idnk-204ENSMUST00000226010 1898 ntBASIC15.15■□□□□ 0.02
Snrnp40Q6PE01 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC15.15■□□□□ 0.02
Snrnp40Q6PE01 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Snrnp40Q6PE01 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Snrnp40Q6PE01 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC15.15■□□□□ 0.02
Snrnp40Q6PE01 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Snrnp40Q6PE01 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Snrnp40Q6PE01 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Snrnp40Q6PE01 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Snrnp40Q6PE01 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Snrnp40Q6PE01 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Snrnp40Q6PE01 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Snrnp40Q6PE01 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Snrnp40Q6PE01 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Snrnp40Q6PE01 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC15.14■□□□□ 0.01
Snrnp40Q6PE01 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Snrnp40Q6PE01 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Snrnp40Q6PE01 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Snrnp40Q6PE01 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Snrnp40Q6PE01 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Snrnp40Q6PE01 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC15.14■□□□□ 0.01
Snrnp40Q6PE01 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Snrnp40Q6PE01 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Snrnp40Q6PE01 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Snrnp40Q6PE01 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC15.14■□□□□ 0.01
Snrnp40Q6PE01 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Snrnp40Q6PE01 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC15.14■□□□□ 0.01
Snrnp40Q6PE01 AW822252-206ENSMUST00000208904 237 ntBASIC15.14■□□□□ 0.01
Snrnp40Q6PE01 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Snrnp40Q6PE01 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
Snrnp40Q6PE01 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Snrnp40Q6PE01 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Snrnp40Q6PE01 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Snrnp40Q6PE01 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Snrnp40Q6PE01 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Snrnp40Q6PE01 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Snrnp40Q6PE01 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Snrnp40Q6PE01 Gm19721-201ENSMUST00000195284 1764 ntBASIC15.13■□□□□ 0.01
Snrnp40Q6PE01 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC15.13■□□□□ 0.01
Snrnp40Q6PE01 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Snrnp40Q6PE01 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Snrnp40Q6PE01 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
Snrnp40Q6PE01 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC15.13■□□□□ 0.01
Snrnp40Q6PE01 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Snrnp40Q6PE01 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC15.13■□□□□ 0.01
Snrnp40Q6PE01 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Snrnp40Q6PE01 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Snrnp40Q6PE01 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC15.13■□□□□ 0.01
Snrnp40Q6PE01 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
Snrnp40Q6PE01 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Snrnp40Q6PE01 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Snrnp40Q6PE01 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Snrnp40Q6PE01 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Snrnp40Q6PE01 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Snrnp40Q6PE01 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Snrnp40Q6PE01 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Snrnp40Q6PE01 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Snrnp40Q6PE01 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Snrnp40Q6PE01 Gm43272-201ENSMUST00000200599 1584 ntBASIC15.12■□□□□ 0.01
Snrnp40Q6PE01 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Snrnp40Q6PE01 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Snrnp40Q6PE01 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Snrnp40Q6PE01 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Snrnp40Q6PE01 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms