Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Chd4Q6PDQ2 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Chd4Q6PDQ2 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Chd4Q6PDQ2 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Chd4Q6PDQ2 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Chd4Q6PDQ2 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Chd4Q6PDQ2 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC22.55■■□□□ 1.2
Chd4Q6PDQ2 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
Chd4Q6PDQ2 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Chd4Q6PDQ2 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Chd4Q6PDQ2 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
Chd4Q6PDQ2 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Chd4Q6PDQ2 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Chd4Q6PDQ2 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Chd4Q6PDQ2 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC22.54■■□□□ 1.2
Chd4Q6PDQ2 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
Chd4Q6PDQ2 Gm27459-201ENSMUST00000184860 107 ntBASIC22.54■■□□□ 1.2
Chd4Q6PDQ2 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC22.54■■□□□ 1.2
Chd4Q6PDQ2 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
Chd4Q6PDQ2 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Chd4Q6PDQ2 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC22.54■■□□□ 1.2
Chd4Q6PDQ2 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Chd4Q6PDQ2 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Chd4Q6PDQ2 Gm6190-201ENSMUST00000220683 1374 ntBASIC22.53■■□□□ 1.2
Chd4Q6PDQ2 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Chd4Q6PDQ2 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Chd4Q6PDQ2 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Chd4Q6PDQ2 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Chd4Q6PDQ2 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Chd4Q6PDQ2 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Chd4Q6PDQ2 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Chd4Q6PDQ2 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Chd4Q6PDQ2 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC22.53■■□□□ 1.2
Chd4Q6PDQ2 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Chd4Q6PDQ2 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
Chd4Q6PDQ2 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC22.53■■□□□ 1.2
Chd4Q6PDQ2 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Chd4Q6PDQ2 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Chd4Q6PDQ2 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC22.53■■□□□ 1.2
Chd4Q6PDQ2 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Chd4Q6PDQ2 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC22.52■■□□□ 1.2
Chd4Q6PDQ2 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
Chd4Q6PDQ2 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
Chd4Q6PDQ2 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC22.52■■□□□ 1.2
Chd4Q6PDQ2 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Chd4Q6PDQ2 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
Chd4Q6PDQ2 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC22.52■■□□□ 1.2
Chd4Q6PDQ2 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Chd4Q6PDQ2 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
Chd4Q6PDQ2 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
Chd4Q6PDQ2 Gm5112-201ENSMUST00000204407 2368 ntBASIC22.51■■□□□ 1.19
Chd4Q6PDQ2 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Chd4Q6PDQ2 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
Chd4Q6PDQ2 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC22.51■■□□□ 1.19
Chd4Q6PDQ2 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Chd4Q6PDQ2 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Chd4Q6PDQ2 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Chd4Q6PDQ2 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
Chd4Q6PDQ2 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
Chd4Q6PDQ2 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
Chd4Q6PDQ2 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Chd4Q6PDQ2 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Chd4Q6PDQ2 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Chd4Q6PDQ2 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Chd4Q6PDQ2 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC22.51■■□□□ 1.19
Chd4Q6PDQ2 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC22.51■■□□□ 1.19
Chd4Q6PDQ2 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
Chd4Q6PDQ2 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
Chd4Q6PDQ2 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Chd4Q6PDQ2 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Chd4Q6PDQ2 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Chd4Q6PDQ2 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC22.5■■□□□ 1.19
Chd4Q6PDQ2 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Chd4Q6PDQ2 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC22.5■■□□□ 1.19
Chd4Q6PDQ2 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Chd4Q6PDQ2 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Chd4Q6PDQ2 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Chd4Q6PDQ2 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Chd4Q6PDQ2 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Chd4Q6PDQ2 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC22.49■■□□□ 1.19
Chd4Q6PDQ2 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Chd4Q6PDQ2 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Chd4Q6PDQ2 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC22.49■■□□□ 1.19
Chd4Q6PDQ2 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Chd4Q6PDQ2 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Chd4Q6PDQ2 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
Chd4Q6PDQ2 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
Chd4Q6PDQ2 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC22.49■■□□□ 1.19
Chd4Q6PDQ2 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC22.49■■□□□ 1.19
Chd4Q6PDQ2 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Chd4Q6PDQ2 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Chd4Q6PDQ2 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
Chd4Q6PDQ2 AL590614.2-201ENSMUST00000225374 1937 ntBASIC22.48■■□□□ 1.19
Chd4Q6PDQ2 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Chd4Q6PDQ2 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Chd4Q6PDQ2 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC22.48■■□□□ 1.19
Chd4Q6PDQ2 Birc2-201ENSMUST00000054878 378 ntBASIC22.48■■□□□ 1.19
Chd4Q6PDQ2 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Chd4Q6PDQ2 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Chd4Q6PDQ2 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 104.6 ms