Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
Smarcc2Q6PDG5 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC20.15■□□□□ 0.82
Smarcc2Q6PDG5 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Smarcc2Q6PDG5 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Smarcc2Q6PDG5 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Smarcc2Q6PDG5 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC20.14■□□□□ 0.82
Smarcc2Q6PDG5 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Smarcc2Q6PDG5 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Smarcc2Q6PDG5 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.81
Smarcc2Q6PDG5 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Smarcc2Q6PDG5 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Smarcc2Q6PDG5 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Smarcc2Q6PDG5 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Smarcc2Q6PDG5 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Smarcc2Q6PDG5 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Smarcc2Q6PDG5 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Smarcc2Q6PDG5 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Smarcc2Q6PDG5 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Smarcc2Q6PDG5 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Smarcc2Q6PDG5 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Smarcc2Q6PDG5 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC20.13■□□□□ 0.81
Smarcc2Q6PDG5 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Smarcc2Q6PDG5 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Smarcc2Q6PDG5 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Smarcc2Q6PDG5 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Smarcc2Q6PDG5 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
Smarcc2Q6PDG5 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Smarcc2Q6PDG5 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Smarcc2Q6PDG5 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC20.13■□□□□ 0.81
Smarcc2Q6PDG5 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Smarcc2Q6PDG5 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Smarcc2Q6PDG5 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Smarcc2Q6PDG5 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Smarcc2Q6PDG5 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Smarcc2Q6PDG5 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Smarcc2Q6PDG5 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Smarcc2Q6PDG5 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Smarcc2Q6PDG5 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC20.12■□□□□ 0.81
Smarcc2Q6PDG5 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Smarcc2Q6PDG5 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Smarcc2Q6PDG5 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC20.12■□□□□ 0.81
Smarcc2Q6PDG5 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Smarcc2Q6PDG5 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Smarcc2Q6PDG5 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC20.12■□□□□ 0.81
Smarcc2Q6PDG5 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Smarcc2Q6PDG5 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Smarcc2Q6PDG5 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC20.11■□□□□ 0.81
Smarcc2Q6PDG5 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Smarcc2Q6PDG5 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Smarcc2Q6PDG5 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Smarcc2Q6PDG5 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC20.11■□□□□ 0.81
Smarcc2Q6PDG5 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC20.11■□□□□ 0.81
Smarcc2Q6PDG5 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
Smarcc2Q6PDG5 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Smarcc2Q6PDG5 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Smarcc2Q6PDG5 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Smarcc2Q6PDG5 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Smarcc2Q6PDG5 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Smarcc2Q6PDG5 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Smarcc2Q6PDG5 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Smarcc2Q6PDG5 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Smarcc2Q6PDG5 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Smarcc2Q6PDG5 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Smarcc2Q6PDG5 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Smarcc2Q6PDG5 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Smarcc2Q6PDG5 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Smarcc2Q6PDG5 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Smarcc2Q6PDG5 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Smarcc2Q6PDG5 Mir5122-201ENSMUST00000175004 89 ntBASIC20.1■□□□□ 0.81
Smarcc2Q6PDG5 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Smarcc2Q6PDG5 Gm37055-201ENSMUST00000191866 133 ntBASIC20.1■□□□□ 0.81
Smarcc2Q6PDG5 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Smarcc2Q6PDG5 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Smarcc2Q6PDG5 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Smarcc2Q6PDG5 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Smarcc2Q6PDG5 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Smarcc2Q6PDG5 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC20.09■□□□□ 0.81
Smarcc2Q6PDG5 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Smarcc2Q6PDG5 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Smarcc2Q6PDG5 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Smarcc2Q6PDG5 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC20.09■□□□□ 0.81
Smarcc2Q6PDG5 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC20.09■□□□□ 0.81
Smarcc2Q6PDG5 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Smarcc2Q6PDG5 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Smarcc2Q6PDG5 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Smarcc2Q6PDG5 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC20.09■□□□□ 0.81
Smarcc2Q6PDG5 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Smarcc2Q6PDG5 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC20.09■□□□□ 0.81
Smarcc2Q6PDG5 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC20.09■□□□□ 0.81
Smarcc2Q6PDG5 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Smarcc2Q6PDG5 Gm16042-201ENSMUST00000204813 1247 ntBASIC20.09■□□□□ 0.81
Smarcc2Q6PDG5 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Smarcc2Q6PDG5 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Smarcc2Q6PDG5 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Smarcc2Q6PDG5 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Smarcc2Q6PDG5 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Smarcc2Q6PDG5 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Smarcc2Q6PDG5 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Smarcc2Q6PDG5 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Smarcc2Q6PDG5 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms