Protein–RNA interactions for Protein: Q6NZM9

Hdac4, Histone deacetylase 4, mousemouse

Predictions only

Length 1,076 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac4Q6NZM9 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hdac4Q6NZM9 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hdac4Q6NZM9 Gm17661-201ENSMUST00000170317 270 ntBASIC19.3■□□□□ 0.68
Hdac4Q6NZM9 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Hdac4Q6NZM9 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Hdac4Q6NZM9 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hdac4Q6NZM9 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hdac4Q6NZM9 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Hdac4Q6NZM9 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hdac4Q6NZM9 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Hdac4Q6NZM9 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hdac4Q6NZM9 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hdac4Q6NZM9 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hdac4Q6NZM9 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hdac4Q6NZM9 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hdac4Q6NZM9 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Hdac4Q6NZM9 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC19.29■□□□□ 0.68
Hdac4Q6NZM9 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hdac4Q6NZM9 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hdac4Q6NZM9 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hdac4Q6NZM9 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hdac4Q6NZM9 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC19.29■□□□□ 0.68
Hdac4Q6NZM9 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Hdac4Q6NZM9 Gm37025-201ENSMUST00000195159 829 ntBASIC19.29■□□□□ 0.68
Hdac4Q6NZM9 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC19.29■□□□□ 0.68
Hdac4Q6NZM9 AC154649.1-201ENSMUST00000227392 384 ntBASIC19.29■□□□□ 0.68
Hdac4Q6NZM9 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hdac4Q6NZM9 Gm10461-201ENSMUST00000202073 4786 ntBASIC19.29■□□□□ 0.68
Hdac4Q6NZM9 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hdac4Q6NZM9 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Hdac4Q6NZM9 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Hdac4Q6NZM9 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hdac4Q6NZM9 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Hdac4Q6NZM9 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hdac4Q6NZM9 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
Hdac4Q6NZM9 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Hdac4Q6NZM9 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Hdac4Q6NZM9 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hdac4Q6NZM9 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hdac4Q6NZM9 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hdac4Q6NZM9 Gm16042-201ENSMUST00000204813 1247 ntBASIC19.28■□□□□ 0.68
Hdac4Q6NZM9 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Hdac4Q6NZM9 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hdac4Q6NZM9 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hdac4Q6NZM9 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hdac4Q6NZM9 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Hdac4Q6NZM9 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hdac4Q6NZM9 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC19.27■□□□□ 0.68
Hdac4Q6NZM9 Gm12085-201ENSMUST00000119263 940 ntBASIC19.27■□□□□ 0.68
Hdac4Q6NZM9 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Hdac4Q6NZM9 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Hdac4Q6NZM9 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Hdac4Q6NZM9 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hdac4Q6NZM9 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hdac4Q6NZM9 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hdac4Q6NZM9 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Hdac4Q6NZM9 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Hdac4Q6NZM9 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Hdac4Q6NZM9 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Hdac4Q6NZM9 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC19.27■□□□□ 0.67
Hdac4Q6NZM9 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hdac4Q6NZM9 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hdac4Q6NZM9 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Hdac4Q6NZM9 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC19.26■□□□□ 0.67
Hdac4Q6NZM9 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
Hdac4Q6NZM9 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hdac4Q6NZM9 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hdac4Q6NZM9 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Hdac4Q6NZM9 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hdac4Q6NZM9 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Hdac4Q6NZM9 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Hdac4Q6NZM9 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hdac4Q6NZM9 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hdac4Q6NZM9 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC19.26■□□□□ 0.67
Hdac4Q6NZM9 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hdac4Q6NZM9 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
Hdac4Q6NZM9 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hdac4Q6NZM9 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hdac4Q6NZM9 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hdac4Q6NZM9 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hdac4Q6NZM9 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hdac4Q6NZM9 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hdac4Q6NZM9 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Hdac4Q6NZM9 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Hdac4Q6NZM9 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
Hdac4Q6NZM9 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Hdac4Q6NZM9 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
Hdac4Q6NZM9 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hdac4Q6NZM9 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hdac4Q6NZM9 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Hdac4Q6NZM9 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hdac4Q6NZM9 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hdac4Q6NZM9 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hdac4Q6NZM9 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC19.25■□□□□ 0.67
Hdac4Q6NZM9 Gm11620-201ENSMUST00000118770 1845 ntBASIC19.25■□□□□ 0.67
Hdac4Q6NZM9 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hdac4Q6NZM9 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Hdac4Q6NZM9 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hdac4Q6NZM9 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC19.24■□□□□ 0.67
Hdac4Q6NZM9 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms