Protein–RNA interactions for Protein: Q6DIC0

Smarca2, Probable global transcription activator SNF2L2, mousemouse

Predictions only

Length 1,577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca2Q6DIC0 Gm11594-201ENSMUST00000122313 162 ntBASIC30.35■■■□□ 2.45
Smarca2Q6DIC0 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC30.35■■■□□ 2.45
Smarca2Q6DIC0 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC30.35■■■□□ 2.45
Smarca2Q6DIC0 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC30.35■■■□□ 2.45
Smarca2Q6DIC0 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC30.35■■■□□ 2.45
Smarca2Q6DIC0 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
Smarca2Q6DIC0 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC30.34■■■□□ 2.45
Smarca2Q6DIC0 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
Smarca2Q6DIC0 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
Smarca2Q6DIC0 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC30.34■■■□□ 2.45
Smarca2Q6DIC0 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC30.34■■■□□ 2.45
Smarca2Q6DIC0 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
Smarca2Q6DIC0 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC30.34■■■□□ 2.45
Smarca2Q6DIC0 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC30.33■■■□□ 2.45
Smarca2Q6DIC0 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Smarca2Q6DIC0 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Smarca2Q6DIC0 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
Smarca2Q6DIC0 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Smarca2Q6DIC0 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Smarca2Q6DIC0 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC30.33■■■□□ 2.45
Smarca2Q6DIC0 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC30.33■■■□□ 2.45
Smarca2Q6DIC0 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC30.33■■■□□ 2.45
Smarca2Q6DIC0 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC30.33■■■□□ 2.45
Smarca2Q6DIC0 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC30.33■■■□□ 2.45
Smarca2Q6DIC0 Gm44357-201ENSMUST00000195897 142 ntBASIC30.32■■■□□ 2.45
Smarca2Q6DIC0 Gm19658-201ENSMUST00000196231 138 ntBASIC30.32■■■□□ 2.45
Smarca2Q6DIC0 Gm44367-201ENSMUST00000196836 138 ntBASIC30.32■■■□□ 2.45
Smarca2Q6DIC0 Gm44350-201ENSMUST00000197197 138 ntBASIC30.32■■■□□ 2.45
Smarca2Q6DIC0 Gm44390-201ENSMUST00000197533 144 ntBASIC30.32■■■□□ 2.45
Smarca2Q6DIC0 Gm44313-201ENSMUST00000198018 138 ntBASIC30.32■■■□□ 2.45
Smarca2Q6DIC0 Gm44486-201ENSMUST00000198508 138 ntBASIC30.32■■■□□ 2.45
Smarca2Q6DIC0 Gm44454-201ENSMUST00000198541 138 ntBASIC30.32■■■□□ 2.45
Smarca2Q6DIC0 Gm44314-201ENSMUST00000199263 138 ntBASIC30.32■■■□□ 2.45
Smarca2Q6DIC0 Gm44394-201ENSMUST00000199558 138 ntBASIC30.32■■■□□ 2.45
Smarca2Q6DIC0 Gm44484-201ENSMUST00000199873 138 ntBASIC30.32■■■□□ 2.45
Smarca2Q6DIC0 Gm44466-201ENSMUST00000200264 138 ntBASIC30.32■■■□□ 2.45
Smarca2Q6DIC0 Gm44359-201ENSMUST00000200671 138 ntBASIC30.32■■■□□ 2.45
Smarca2Q6DIC0 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC30.32■■■□□ 2.45
Smarca2Q6DIC0 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.45
Smarca2Q6DIC0 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC30.32■■■□□ 2.45
Smarca2Q6DIC0 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.45
Smarca2Q6DIC0 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC30.32■■■□□ 2.44
Smarca2Q6DIC0 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC30.32■■■□□ 2.44
Smarca2Q6DIC0 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC30.32■■■□□ 2.44
Smarca2Q6DIC0 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC30.32■■■□□ 2.44
Smarca2Q6DIC0 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
Smarca2Q6DIC0 Mir5131-201ENSMUST00000175426 93 ntBASIC30.32■■■□□ 2.44
Smarca2Q6DIC0 Gm18421-201ENSMUST00000204122 625 ntBASIC30.32■■■□□ 2.44
Smarca2Q6DIC0 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC30.31■■■□□ 2.44
Smarca2Q6DIC0 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Smarca2Q6DIC0 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC30.31■■■□□ 2.44
Smarca2Q6DIC0 Gm43332-201ENSMUST00000202511 1044 ntBASIC30.31■■■□□ 2.44
Smarca2Q6DIC0 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Smarca2Q6DIC0 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Smarca2Q6DIC0 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC30.31■■■□□ 2.44
Smarca2Q6DIC0 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Smarca2Q6DIC0 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC30.3■■■□□ 2.44
Smarca2Q6DIC0 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC30.3■■■□□ 2.44
Smarca2Q6DIC0 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC30.3■■■□□ 2.44
Smarca2Q6DIC0 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC30.3■■■□□ 2.44
Smarca2Q6DIC0 Gm8000-201ENSMUST00000188378 592 ntBASIC30.3■■■□□ 2.44
Smarca2Q6DIC0 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Smarca2Q6DIC0 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
Smarca2Q6DIC0 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC30.3■■■□□ 2.44
Smarca2Q6DIC0 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Smarca2Q6DIC0 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC30.29■■■□□ 2.44
Smarca2Q6DIC0 Gm7935-201ENSMUST00000100555 1278 ntBASIC30.29■■■□□ 2.44
Smarca2Q6DIC0 Gm12644-201ENSMUST00000119935 606 ntBASIC30.29■■■□□ 2.44
Smarca2Q6DIC0 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
Smarca2Q6DIC0 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Smarca2Q6DIC0 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
Smarca2Q6DIC0 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Smarca2Q6DIC0 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Smarca2Q6DIC0 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Smarca2Q6DIC0 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC30.29■■■□□ 2.44
Smarca2Q6DIC0 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Smarca2Q6DIC0 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC30.28■■■□□ 2.44
Smarca2Q6DIC0 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
Smarca2Q6DIC0 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC30.28■■■□□ 2.44
Smarca2Q6DIC0 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Smarca2Q6DIC0 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
Smarca2Q6DIC0 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
Smarca2Q6DIC0 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC30.28■■■□□ 2.44
Smarca2Q6DIC0 Gm38342-201ENSMUST00000195710 2980 ntBASIC30.28■■■□□ 2.44
Smarca2Q6DIC0 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC30.28■■■□□ 2.44
Smarca2Q6DIC0 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC30.28■■■□□ 2.44
Smarca2Q6DIC0 Gm11779-201ENSMUST00000118541 368 ntBASIC30.28■■■□□ 2.44
Smarca2Q6DIC0 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
Smarca2Q6DIC0 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Smarca2Q6DIC0 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC30.28■■■□□ 2.44
Smarca2Q6DIC0 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
Smarca2Q6DIC0 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Smarca2Q6DIC0 Dmtn-210ENSMUST00000228824 2377 ntBASIC30.27■■■□□ 2.44
Smarca2Q6DIC0 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC30.27■■■□□ 2.44
Smarca2Q6DIC0 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
Smarca2Q6DIC0 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC30.27■■■□□ 2.44
Smarca2Q6DIC0 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC30.27■■■□□ 2.44
Smarca2Q6DIC0 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Smarca2Q6DIC0 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.44
Smarca2Q6DIC0 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.44
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms