Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scube3Q66PY1 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scube3Q66PY1 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scube3Q66PY1 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scube3Q66PY1 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scube3Q66PY1 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scube3Q66PY1 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Scube3Q66PY1 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Scube3Q66PY1 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scube3Q66PY1 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scube3Q66PY1 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Scube3Q66PY1 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
Scube3Q66PY1 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scube3Q66PY1 Gm7791-201ENSMUST00000219066 539 ntBASIC18.11■□□□□ 0.49
Scube3Q66PY1 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Scube3Q66PY1 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Scube3Q66PY1 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
Scube3Q66PY1 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Scube3Q66PY1 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC18.11■□□□□ 0.49
Scube3Q66PY1 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scube3Q66PY1 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scube3Q66PY1 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scube3Q66PY1 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scube3Q66PY1 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Scube3Q66PY1 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scube3Q66PY1 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Scube3Q66PY1 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scube3Q66PY1 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scube3Q66PY1 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scube3Q66PY1 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scube3Q66PY1 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
Scube3Q66PY1 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.1■□□□□ 0.49
Scube3Q66PY1 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scube3Q66PY1 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC18.1■□□□□ 0.49
Scube3Q66PY1 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC18.1■□□□□ 0.49
Scube3Q66PY1 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Scube3Q66PY1 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Scube3Q66PY1 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scube3Q66PY1 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC18.1■□□□□ 0.49
Scube3Q66PY1 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Scube3Q66PY1 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scube3Q66PY1 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scube3Q66PY1 Gm9731-201ENSMUST00000209480 747 ntBASIC18.1■□□□□ 0.49
Scube3Q66PY1 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Scube3Q66PY1 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.1■□□□□ 0.49
Scube3Q66PY1 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scube3Q66PY1 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Scube3Q66PY1 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scube3Q66PY1 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Scube3Q66PY1 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scube3Q66PY1 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scube3Q66PY1 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scube3Q66PY1 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scube3Q66PY1 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC18.09■□□□□ 0.49
Scube3Q66PY1 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Scube3Q66PY1 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scube3Q66PY1 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scube3Q66PY1 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Scube3Q66PY1 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.09■□□□□ 0.49
Scube3Q66PY1 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC18.08■□□□□ 0.49
Scube3Q66PY1 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Scube3Q66PY1 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Scube3Q66PY1 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Scube3Q66PY1 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Scube3Q66PY1 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Scube3Q66PY1 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Scube3Q66PY1 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Scube3Q66PY1 Gm17661-201ENSMUST00000170317 270 ntBASIC18.08■□□□□ 0.48
Scube3Q66PY1 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Scube3Q66PY1 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Scube3Q66PY1 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Scube3Q66PY1 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.08■□□□□ 0.48
Scube3Q66PY1 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Scube3Q66PY1 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Scube3Q66PY1 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Scube3Q66PY1 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Scube3Q66PY1 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Scube3Q66PY1 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Scube3Q66PY1 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Scube3Q66PY1 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Scube3Q66PY1 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Scube3Q66PY1 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Scube3Q66PY1 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Scube3Q66PY1 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Scube3Q66PY1 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Scube3Q66PY1 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC18.07■□□□□ 0.48
Scube3Q66PY1 Gm4217-201ENSMUST00000182243 1002 ntBASIC18.07■□□□□ 0.48
Scube3Q66PY1 AC120002.2-201ENSMUST00000220205 773 ntBASIC18.07■□□□□ 0.48
Scube3Q66PY1 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Scube3Q66PY1 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Scube3Q66PY1 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Scube3Q66PY1 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Scube3Q66PY1 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Scube3Q66PY1 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Scube3Q66PY1 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Scube3Q66PY1 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Scube3Q66PY1 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Scube3Q66PY1 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Scube3Q66PY1 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Scube3Q66PY1 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms