Protein–RNA interactions for Protein: Q64727

Vcl, Vinculin, mousemouse

Known RBP Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VclQ64727 Gm24841-201ENSMUST00000158676 357 ntBASIC16.99■□□□□ 0.31
VclQ64727 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC16.99■□□□□ 0.31
VclQ64727 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC16.99■□□□□ 0.31
VclQ64727 Gm38027-201ENSMUST00000192315 235 ntBASIC16.99■□□□□ 0.31
VclQ64727 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
VclQ64727 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VclQ64727 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
VclQ64727 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
VclQ64727 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VclQ64727 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
VclQ64727 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC16.99■□□□□ 0.31
VclQ64727 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC16.98■□□□□ 0.31
VclQ64727 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
VclQ64727 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VclQ64727 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VclQ64727 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VclQ64727 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VclQ64727 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
VclQ64727 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC16.98■□□□□ 0.31
VclQ64727 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC16.98■□□□□ 0.31
VclQ64727 Gm20472-201ENSMUST00000174403 1240 ntBASIC16.98■□□□□ 0.31
VclQ64727 Gm27463-201ENSMUST00000183569 57 ntBASIC16.98■□□□□ 0.31
VclQ64727 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
VclQ64727 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VclQ64727 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VclQ64727 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VclQ64727 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VclQ64727 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
VclQ64727 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC16.98■□□□□ 0.31
VclQ64727 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VclQ64727 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VclQ64727 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
VclQ64727 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
VclQ64727 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VclQ64727 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
VclQ64727 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
VclQ64727 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
VclQ64727 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
VclQ64727 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VclQ64727 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
VclQ64727 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.97■□□□□ 0.31
VclQ64727 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
VclQ64727 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
VclQ64727 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VclQ64727 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VclQ64727 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VclQ64727 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC16.97■□□□□ 0.31
VclQ64727 Mir7071-201ENSMUST00000184847 69 ntBASIC16.97■□□□□ 0.31
VclQ64727 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VclQ64727 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VclQ64727 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
VclQ64727 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
VclQ64727 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VclQ64727 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
VclQ64727 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VclQ64727 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC16.96■□□□□ 0.31
VclQ64727 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
VclQ64727 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VclQ64727 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VclQ64727 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC16.96■□□□□ 0.31
VclQ64727 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VclQ64727 Mir8112-201ENSMUST00000184382 131 ntBASIC16.96■□□□□ 0.31
VclQ64727 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VclQ64727 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
VclQ64727 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC16.96■□□□□ 0.31
VclQ64727 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VclQ64727 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VclQ64727 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
VclQ64727 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC16.96■□□□□ 0.31
VclQ64727 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
VclQ64727 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
VclQ64727 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VclQ64727 Gm19439-201ENSMUST00000198195 2273 ntBASIC16.95■□□□□ 0.3
VclQ64727 Gm43272-201ENSMUST00000200599 1584 ntBASIC16.95■□□□□ 0.3
VclQ64727 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VclQ64727 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
VclQ64727 Gm15565-201ENSMUST00000118890 427 ntBASIC16.95■□□□□ 0.3
VclQ64727 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
VclQ64727 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
VclQ64727 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC16.95■□□□□ 0.3
VclQ64727 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
VclQ64727 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
VclQ64727 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC16.95■□□□□ 0.3
VclQ64727 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
VclQ64727 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC16.95■□□□□ 0.3
VclQ64727 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16.95■□□□□ 0.3
VclQ64727 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC16.95■□□□□ 0.3
VclQ64727 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
VclQ64727 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VclQ64727 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
VclQ64727 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VclQ64727 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VclQ64727 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
VclQ64727 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.95■□□□□ 0.3
VclQ64727 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
VclQ64727 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
VclQ64727 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
VclQ64727 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
VclQ64727 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VclQ64727 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms