Protein–RNA interactions for Protein: Q62232

Six2, Homeobox protein SIX2, mousemouse

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six2Q62232 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Six2Q62232 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Six2Q62232 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Six2Q62232 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Six2Q62232 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Six2Q62232 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Six2Q62232 Gm27011-201ENSMUST00000182352 972 ntBASIC18.37■□□□□ 0.53
Six2Q62232 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Six2Q62232 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Six2Q62232 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Six2Q62232 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Six2Q62232 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Six2Q62232 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.37■□□□□ 0.53
Six2Q62232 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Six2Q62232 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.37■□□□□ 0.53
Six2Q62232 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Six2Q62232 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Six2Q62232 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Six2Q62232 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Six2Q62232 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Six2Q62232 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Six2Q62232 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Six2Q62232 Gm12085-201ENSMUST00000119263 940 ntBASIC18.36■□□□□ 0.53
Six2Q62232 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Six2Q62232 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC18.36■□□□□ 0.53
Six2Q62232 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC18.36■□□□□ 0.53
Six2Q62232 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Six2Q62232 Gm16042-201ENSMUST00000204813 1247 ntBASIC18.36■□□□□ 0.53
Six2Q62232 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Six2Q62232 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC18.36■□□□□ 0.53
Six2Q62232 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Six2Q62232 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Six2Q62232 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Six2Q62232 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Six2Q62232 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Six2Q62232 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Six2Q62232 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Six2Q62232 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Six2Q62232 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Six2Q62232 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Six2Q62232 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Six2Q62232 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Six2Q62232 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Six2Q62232 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Six2Q62232 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Six2Q62232 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Six2Q62232 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
Six2Q62232 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Six2Q62232 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Six2Q62232 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Six2Q62232 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Six2Q62232 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Six2Q62232 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Six2Q62232 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Six2Q62232 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Six2Q62232 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Six2Q62232 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Six2Q62232 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Six2Q62232 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Six2Q62232 Gm8520-201ENSMUST00000186517 868 ntBASIC18.34■□□□□ 0.53
Six2Q62232 Gm37025-201ENSMUST00000195159 829 ntBASIC18.34■□□□□ 0.53
Six2Q62232 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Six2Q62232 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Six2Q62232 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Six2Q62232 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Six2Q62232 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Six2Q62232 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Six2Q62232 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Six2Q62232 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Six2Q62232 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Six2Q62232 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Six2Q62232 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Six2Q62232 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Six2Q62232 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Six2Q62232 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Six2Q62232 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Six2Q62232 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC18.33■□□□□ 0.52
Six2Q62232 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Six2Q62232 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Six2Q62232 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC18.33■□□□□ 0.52
Six2Q62232 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC18.33■□□□□ 0.52
Six2Q62232 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Six2Q62232 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Six2Q62232 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Six2Q62232 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Six2Q62232 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Six2Q62232 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Six2Q62232 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Six2Q62232 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Six2Q62232 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Six2Q62232 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Six2Q62232 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Six2Q62232 Gm45774-201ENSMUST00000211992 2665 ntBASIC18.32■□□□□ 0.52
Six2Q62232 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Six2Q62232 Gm38027-201ENSMUST00000192315 235 ntBASIC18.32■□□□□ 0.52
Six2Q62232 AC154649.1-201ENSMUST00000227392 384 ntBASIC18.32■□□□□ 0.52
Six2Q62232 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Six2Q62232 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Six2Q62232 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Six2Q62232 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms