Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Scn9aQ62205 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Scn9aQ62205 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC20.36■□□□□ 0.85
Scn9aQ62205 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Scn9aQ62205 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Scn9aQ62205 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Scn9aQ62205 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Scn9aQ62205 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Scn9aQ62205 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Scn9aQ62205 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
Scn9aQ62205 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Scn9aQ62205 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Scn9aQ62205 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Scn9aQ62205 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Scn9aQ62205 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Scn9aQ62205 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Scn9aQ62205 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Scn9aQ62205 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Scn9aQ62205 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC20.35■□□□□ 0.85
Scn9aQ62205 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Scn9aQ62205 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC20.35■□□□□ 0.85
Scn9aQ62205 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Scn9aQ62205 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Scn9aQ62205 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Scn9aQ62205 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC20.34■□□□□ 0.85
Scn9aQ62205 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Scn9aQ62205 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Scn9aQ62205 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Scn9aQ62205 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.34■□□□□ 0.85
Scn9aQ62205 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Scn9aQ62205 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
Scn9aQ62205 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC20.34■□□□□ 0.85
Scn9aQ62205 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC20.34■□□□□ 0.85
Scn9aQ62205 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Scn9aQ62205 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Scn9aQ62205 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
Scn9aQ62205 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Scn9aQ62205 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Scn9aQ62205 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Scn9aQ62205 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Scn9aQ62205 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Scn9aQ62205 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC20.33■□□□□ 0.84
Scn9aQ62205 Gm44357-201ENSMUST00000195897 142 ntBASIC20.33■□□□□ 0.84
Scn9aQ62205 Gm19658-201ENSMUST00000196231 138 ntBASIC20.33■□□□□ 0.84
Scn9aQ62205 Gm44367-201ENSMUST00000196836 138 ntBASIC20.33■□□□□ 0.84
Scn9aQ62205 Gm44350-201ENSMUST00000197197 138 ntBASIC20.33■□□□□ 0.84
Scn9aQ62205 Gm44390-201ENSMUST00000197533 144 ntBASIC20.33■□□□□ 0.84
Scn9aQ62205 Gm44313-201ENSMUST00000198018 138 ntBASIC20.33■□□□□ 0.84
Scn9aQ62205 Gm44486-201ENSMUST00000198508 138 ntBASIC20.33■□□□□ 0.84
Scn9aQ62205 Gm44454-201ENSMUST00000198541 138 ntBASIC20.33■□□□□ 0.84
Scn9aQ62205 Gm44314-201ENSMUST00000199263 138 ntBASIC20.33■□□□□ 0.84
Scn9aQ62205 Gm44394-201ENSMUST00000199558 138 ntBASIC20.33■□□□□ 0.84
Scn9aQ62205 Gm44484-201ENSMUST00000199873 138 ntBASIC20.33■□□□□ 0.84
Scn9aQ62205 Gm44466-201ENSMUST00000200264 138 ntBASIC20.33■□□□□ 0.84
Scn9aQ62205 Gm44359-201ENSMUST00000200671 138 ntBASIC20.33■□□□□ 0.84
Scn9aQ62205 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
Scn9aQ62205 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
Scn9aQ62205 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Scn9aQ62205 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Scn9aQ62205 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Scn9aQ62205 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC20.33■□□□□ 0.84
Scn9aQ62205 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Scn9aQ62205 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Scn9aQ62205 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Scn9aQ62205 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Scn9aQ62205 Gm1401-201ENSMUST00000122048 772 ntBASIC20.32■□□□□ 0.84
Scn9aQ62205 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
Scn9aQ62205 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Scn9aQ62205 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Scn9aQ62205 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Scn9aQ62205 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Scn9aQ62205 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Scn9aQ62205 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Scn9aQ62205 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Scn9aQ62205 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Scn9aQ62205 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC20.32■□□□□ 0.84
Scn9aQ62205 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC20.32■□□□□ 0.84
Scn9aQ62205 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Scn9aQ62205 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Scn9aQ62205 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Scn9aQ62205 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Scn9aQ62205 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC20.31■□□□□ 0.84
Scn9aQ62205 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC20.31■□□□□ 0.84
Scn9aQ62205 Mir5126-201ENSMUST00000175513 77 ntBASIC20.31■□□□□ 0.84
Scn9aQ62205 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Scn9aQ62205 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC20.31■□□□□ 0.84
Scn9aQ62205 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Scn9aQ62205 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Scn9aQ62205 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Scn9aQ62205 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Scn9aQ62205 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Scn9aQ62205 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC20.3■□□□□ 0.84
Scn9aQ62205 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC20.3■□□□□ 0.84
Scn9aQ62205 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Scn9aQ62205 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Scn9aQ62205 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Scn9aQ62205 Gm27000-201ENSMUST00000182943 842 ntBASIC20.3■□□□□ 0.84
Scn9aQ62205 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Scn9aQ62205 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Scn9aQ62205 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms