Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Six4Q61321 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Six4Q61321 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Six4Q61321 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.41■□□□□ 0.38
Six4Q61321 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Six4Q61321 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Six4Q61321 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC17.41■□□□□ 0.38
Six4Q61321 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
Six4Q61321 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Six4Q61321 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC17.41■□□□□ 0.38
Six4Q61321 Gm30025-201ENSMUST00000218555 728 ntBASIC17.41■□□□□ 0.38
Six4Q61321 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Six4Q61321 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Six4Q61321 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Six4Q61321 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Six4Q61321 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Six4Q61321 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Six4Q61321 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Six4Q61321 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Six4Q61321 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Six4Q61321 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Six4Q61321 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Six4Q61321 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Six4Q61321 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Six4Q61321 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Six4Q61321 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.4■□□□□ 0.38
Six4Q61321 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Six4Q61321 Gm15565-201ENSMUST00000118890 427 ntBASIC17.4■□□□□ 0.38
Six4Q61321 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC17.4■□□□□ 0.38
Six4Q61321 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC17.4■□□□□ 0.38
Six4Q61321 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Six4Q61321 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Six4Q61321 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
Six4Q61321 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Six4Q61321 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Six4Q61321 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC17.4■□□□□ 0.38
Six4Q61321 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Six4Q61321 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Six4Q61321 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.4■□□□□ 0.38
Six4Q61321 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Six4Q61321 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
Six4Q61321 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Six4Q61321 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.4■□□□□ 0.38
Six4Q61321 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Six4Q61321 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Six4Q61321 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Six4Q61321 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Six4Q61321 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC17.4■□□□□ 0.38
Six4Q61321 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Six4Q61321 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.4■□□□□ 0.38
Six4Q61321 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Six4Q61321 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Six4Q61321 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Six4Q61321 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Six4Q61321 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
Six4Q61321 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Six4Q61321 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Six4Q61321 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Six4Q61321 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Six4Q61321 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Six4Q61321 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Six4Q61321 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Six4Q61321 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.39■□□□□ 0.37
Six4Q61321 Gm11539-201ENSMUST00000119837 557 ntBASIC17.39■□□□□ 0.37
Six4Q61321 Gm13436-201ENSMUST00000120418 567 ntBASIC17.39■□□□□ 0.37
Six4Q61321 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Six4Q61321 Gm4217-201ENSMUST00000182243 1002 ntBASIC17.39■□□□□ 0.37
Six4Q61321 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.39■□□□□ 0.37
Six4Q61321 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.39■□□□□ 0.37
Six4Q61321 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC17.39■□□□□ 0.37
Six4Q61321 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Six4Q61321 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Six4Q61321 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Six4Q61321 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Six4Q61321 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Six4Q61321 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Six4Q61321 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Six4Q61321 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Six4Q61321 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Six4Q61321 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Six4Q61321 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Six4Q61321 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Six4Q61321 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Six4Q61321 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Six4Q61321 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Six4Q61321 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Six4Q61321 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Six4Q61321 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
Six4Q61321 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.38■□□□□ 0.37
Six4Q61321 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Six4Q61321 Il3ra-202ENSMUST00000223589 738 ntBASIC17.38■□□□□ 0.37
Six4Q61321 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Six4Q61321 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Six4Q61321 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Six4Q61321 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Six4Q61321 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Six4Q61321 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
Six4Q61321 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Six4Q61321 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Six4Q61321 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms