Protein–RNA interactions for Protein: Q61136

Prpf4b, Serine/threonine-protein kinase PRP4 homolog, mousemouse

Known RBP Predictions only

Length 1,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf4bQ61136 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
Prpf4bQ61136 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.75
Prpf4bQ61136 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC19.76■□□□□ 0.75
Prpf4bQ61136 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Prpf4bQ61136 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Prpf4bQ61136 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Prpf4bQ61136 Gm10654-201ENSMUST00000098653 1633 ntBASIC19.76■□□□□ 0.75
Prpf4bQ61136 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Prpf4bQ61136 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Prpf4bQ61136 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Prpf4bQ61136 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Prpf4bQ61136 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Prpf4bQ61136 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Prpf4bQ61136 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Prpf4bQ61136 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Prpf4bQ61136 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Prpf4bQ61136 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Prpf4bQ61136 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Prpf4bQ61136 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC19.76■□□□□ 0.75
Prpf4bQ61136 Gm10138-203ENSMUST00000206952 366 ntBASIC19.76■□□□□ 0.75
Prpf4bQ61136 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Prpf4bQ61136 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Prpf4bQ61136 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Prpf4bQ61136 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Prpf4bQ61136 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Prpf4bQ61136 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Prpf4bQ61136 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Prpf4bQ61136 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Prpf4bQ61136 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Prpf4bQ61136 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Prpf4bQ61136 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Prpf4bQ61136 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Prpf4bQ61136 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Prpf4bQ61136 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Prpf4bQ61136 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Prpf4bQ61136 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Prpf4bQ61136 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Prpf4bQ61136 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Prpf4bQ61136 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Prpf4bQ61136 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
Prpf4bQ61136 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
Prpf4bQ61136 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Prpf4bQ61136 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Prpf4bQ61136 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Prpf4bQ61136 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Prpf4bQ61136 Gm5643-201ENSMUST00000117081 966 ntBASIC19.75■□□□□ 0.75
Prpf4bQ61136 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Prpf4bQ61136 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Prpf4bQ61136 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Prpf4bQ61136 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Prpf4bQ61136 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Prpf4bQ61136 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC19.75■□□□□ 0.75
Prpf4bQ61136 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Prpf4bQ61136 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Prpf4bQ61136 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Prpf4bQ61136 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Prpf4bQ61136 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Prpf4bQ61136 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Prpf4bQ61136 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Prpf4bQ61136 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC19.74■□□□□ 0.75
Prpf4bQ61136 Mir6349-201ENSMUST00000184059 97 ntBASIC19.74■□□□□ 0.75
Prpf4bQ61136 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Prpf4bQ61136 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Prpf4bQ61136 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Prpf4bQ61136 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Prpf4bQ61136 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Prpf4bQ61136 Gm43272-201ENSMUST00000200599 1584 ntBASIC19.74■□□□□ 0.75
Prpf4bQ61136 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
Prpf4bQ61136 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Prpf4bQ61136 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Prpf4bQ61136 Gm15375-201ENSMUST00000119510 849 ntBASIC19.73■□□□□ 0.75
Prpf4bQ61136 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Prpf4bQ61136 Alkbh1-212ENSMUST00000185301 408 ntBASIC19.73■□□□□ 0.75
Prpf4bQ61136 Gm18666-201ENSMUST00000190039 958 ntBASIC19.73■□□□□ 0.75
Prpf4bQ61136 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC19.73■□□□□ 0.75
Prpf4bQ61136 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Prpf4bQ61136 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Prpf4bQ61136 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Prpf4bQ61136 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Prpf4bQ61136 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Prpf4bQ61136 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Prpf4bQ61136 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Prpf4bQ61136 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Prpf4bQ61136 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Prpf4bQ61136 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC19.72■□□□□ 0.75
Prpf4bQ61136 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Prpf4bQ61136 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Prpf4bQ61136 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Prpf4bQ61136 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Prpf4bQ61136 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Prpf4bQ61136 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Prpf4bQ61136 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Prpf4bQ61136 AC163280.1-201ENSMUST00000228194 1100 ntBASIC19.72■□□□□ 0.75
Prpf4bQ61136 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Prpf4bQ61136 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Prpf4bQ61136 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Prpf4bQ61136 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Prpf4bQ61136 Gm45560-201ENSMUST00000211492 1472 ntBASIC19.72■□□□□ 0.75
Prpf4bQ61136 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Prpf4bQ61136 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms