Protein–RNA interactions for Protein: Q61112

Sdf4, 45 kDa calcium-binding protein, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4Q61112 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.52■□□□□ 0.4
Sdf4Q61112 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sdf4Q61112 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sdf4Q61112 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sdf4Q61112 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Sdf4Q61112 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sdf4Q61112 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Sdf4Q61112 Gm24841-201ENSMUST00000158676 357 ntBASIC17.52■□□□□ 0.4
Sdf4Q61112 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.52■□□□□ 0.4
Sdf4Q61112 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Sdf4Q61112 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.51■□□□□ 0.39
Sdf4Q61112 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sdf4Q61112 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sdf4Q61112 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sdf4Q61112 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Sdf4Q61112 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sdf4Q61112 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sdf4Q61112 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Sdf4Q61112 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Sdf4Q61112 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sdf4Q61112 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Sdf4Q61112 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.51■□□□□ 0.39
Sdf4Q61112 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.51■□□□□ 0.39
Sdf4Q61112 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sdf4Q61112 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Sdf4Q61112 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sdf4Q61112 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.51■□□□□ 0.39
Sdf4Q61112 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.5■□□□□ 0.39
Sdf4Q61112 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sdf4Q61112 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sdf4Q61112 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sdf4Q61112 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sdf4Q61112 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sdf4Q61112 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sdf4Q61112 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sdf4Q61112 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sdf4Q61112 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sdf4Q61112 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Sdf4Q61112 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.5■□□□□ 0.39
Sdf4Q61112 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Sdf4Q61112 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sdf4Q61112 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Sdf4Q61112 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
Sdf4Q61112 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.5■□□□□ 0.39
Sdf4Q61112 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sdf4Q61112 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Sdf4Q61112 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Sdf4Q61112 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sdf4Q61112 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sdf4Q61112 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sdf4Q61112 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sdf4Q61112 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sdf4Q61112 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sdf4Q61112 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Sdf4Q61112 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sdf4Q61112 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.49■□□□□ 0.39
Sdf4Q61112 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Sdf4Q61112 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Sdf4Q61112 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sdf4Q61112 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.49■□□□□ 0.39
Sdf4Q61112 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Sdf4Q61112 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC17.49■□□□□ 0.39
Sdf4Q61112 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17.49■□□□□ 0.39
Sdf4Q61112 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sdf4Q61112 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sdf4Q61112 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Sdf4Q61112 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sdf4Q61112 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sdf4Q61112 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sdf4Q61112 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sdf4Q61112 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Sdf4Q61112 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sdf4Q61112 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sdf4Q61112 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sdf4Q61112 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sdf4Q61112 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sdf4Q61112 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sdf4Q61112 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Sdf4Q61112 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sdf4Q61112 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.48■□□□□ 0.39
Sdf4Q61112 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sdf4Q61112 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Sdf4Q61112 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sdf4Q61112 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC17.48■□□□□ 0.39
Sdf4Q61112 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.48■□□□□ 0.39
Sdf4Q61112 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.48■□□□□ 0.39
Sdf4Q61112 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC17.48■□□□□ 0.39
Sdf4Q61112 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sdf4Q61112 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sdf4Q61112 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Sdf4Q61112 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
Sdf4Q61112 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Sdf4Q61112 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sdf4Q61112 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sdf4Q61112 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Sdf4Q61112 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Sdf4Q61112 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.47■□□□□ 0.39
Sdf4Q61112 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sdf4Q61112 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sdf4Q61112 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms