Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Slc6a4Q60857 Gm18101-201ENSMUST00000215769 548 ntBASIC17.67■□□□□ 0.42
Slc6a4Q60857 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Slc6a4Q60857 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Slc6a4Q60857 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Slc6a4Q60857 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Slc6a4Q60857 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Slc6a4Q60857 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Slc6a4Q60857 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.67■□□□□ 0.42
Slc6a4Q60857 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Slc6a4Q60857 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.67■□□□□ 0.42
Slc6a4Q60857 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Slc6a4Q60857 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Slc6a4Q60857 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Slc6a4Q60857 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Slc6a4Q60857 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Slc6a4Q60857 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Slc6a4Q60857 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
Slc6a4Q60857 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Slc6a4Q60857 Gm23634-201ENSMUST00000175071 91 ntBASIC17.66■□□□□ 0.42
Slc6a4Q60857 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Slc6a4Q60857 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC17.66■□□□□ 0.42
Slc6a4Q60857 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC17.66■□□□□ 0.42
Slc6a4Q60857 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.66■□□□□ 0.42
Slc6a4Q60857 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.66■□□□□ 0.42
Slc6a4Q60857 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.66■□□□□ 0.42
Slc6a4Q60857 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Slc6a4Q60857 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Slc6a4Q60857 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Slc6a4Q60857 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Slc6a4Q60857 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Slc6a4Q60857 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Slc6a4Q60857 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Slc6a4Q60857 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Slc6a4Q60857 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.66■□□□□ 0.42
Slc6a4Q60857 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Slc6a4Q60857 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Slc6a4Q60857 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Slc6a4Q60857 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Slc6a4Q60857 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Slc6a4Q60857 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.65■□□□□ 0.42
Slc6a4Q60857 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Slc6a4Q60857 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Slc6a4Q60857 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Slc6a4Q60857 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Slc6a4Q60857 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Slc6a4Q60857 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC17.64■□□□□ 0.42
Slc6a4Q60857 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Slc6a4Q60857 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Slc6a4Q60857 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.64■□□□□ 0.41
Slc6a4Q60857 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.64■□□□□ 0.41
Slc6a4Q60857 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Slc6a4Q60857 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC17.64■□□□□ 0.41
Slc6a4Q60857 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC17.64■□□□□ 0.41
Slc6a4Q60857 Gm7213-201ENSMUST00000215977 950 ntBASIC17.64■□□□□ 0.41
Slc6a4Q60857 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC17.64■□□□□ 0.41
Slc6a4Q60857 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Slc6a4Q60857 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Slc6a4Q60857 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Slc6a4Q60857 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Slc6a4Q60857 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Slc6a4Q60857 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Slc6a4Q60857 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Slc6a4Q60857 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Slc6a4Q60857 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Slc6a4Q60857 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Slc6a4Q60857 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Slc6a4Q60857 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Slc6a4Q60857 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Slc6a4Q60857 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Slc6a4Q60857 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Slc6a4Q60857 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC17.63■□□□□ 0.41
Slc6a4Q60857 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Slc6a4Q60857 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Slc6a4Q60857 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Slc6a4Q60857 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Slc6a4Q60857 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Slc6a4Q60857 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Slc6a4Q60857 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Slc6a4Q60857 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Slc6a4Q60857 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Slc6a4Q60857 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Slc6a4Q60857 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.62■□□□□ 0.41
Slc6a4Q60857 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Slc6a4Q60857 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.62■□□□□ 0.41
Slc6a4Q60857 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Slc6a4Q60857 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Slc6a4Q60857 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC17.62■□□□□ 0.41
Slc6a4Q60857 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC17.62■□□□□ 0.41
Slc6a4Q60857 Gm3272-201ENSMUST00000181181 1229 ntBASIC17.62■□□□□ 0.41
Slc6a4Q60857 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Slc6a4Q60857 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Slc6a4Q60857 Gm10566-201ENSMUST00000086739 996 ntBASIC17.62■□□□□ 0.41
Slc6a4Q60857 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Slc6a4Q60857 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Slc6a4Q60857 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Slc6a4Q60857 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Slc6a4Q60857 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Slc6a4Q60857 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Slc6a4Q60857 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms