Protein–RNA interactions for Protein: Q60855

Ripk1, Receptor-interacting serine/threonine-protein kinase 1, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ripk1Q60855 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ripk1Q60855 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ripk1Q60855 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ripk1Q60855 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ripk1Q60855 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ripk1Q60855 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Ripk1Q60855 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ripk1Q60855 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ripk1Q60855 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ripk1Q60855 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Ripk1Q60855 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ripk1Q60855 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ripk1Q60855 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ripk1Q60855 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Ripk1Q60855 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
Ripk1Q60855 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Ripk1Q60855 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Ripk1Q60855 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC16.29■□□□□ 0.2
Ripk1Q60855 Gm42545-201ENSMUST00000202755 922 ntBASIC16.29■□□□□ 0.2
Ripk1Q60855 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC16.29■□□□□ 0.2
Ripk1Q60855 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Ripk1Q60855 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Ripk1Q60855 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ripk1Q60855 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ripk1Q60855 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ripk1Q60855 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Ripk1Q60855 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ripk1Q60855 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Ripk1Q60855 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ripk1Q60855 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Ripk1Q60855 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ripk1Q60855 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC16.29■□□□□ 0.2
Ripk1Q60855 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ripk1Q60855 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ripk1Q60855 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ripk1Q60855 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16.28■□□□□ 0.2
Ripk1Q60855 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ripk1Q60855 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ripk1Q60855 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ripk1Q60855 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC16.28■□□□□ 0.2
Ripk1Q60855 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ripk1Q60855 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC16.28■□□□□ 0.2
Ripk1Q60855 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ripk1Q60855 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Ripk1Q60855 Gm5643-201ENSMUST00000117081 966 ntBASIC16.28■□□□□ 0.2
Ripk1Q60855 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC16.28■□□□□ 0.2
Ripk1Q60855 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ripk1Q60855 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC16.28■□□□□ 0.2
Ripk1Q60855 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ripk1Q60855 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ripk1Q60855 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ripk1Q60855 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.28■□□□□ 0.2
Ripk1Q60855 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ripk1Q60855 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Ripk1Q60855 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC16.28■□□□□ 0.2
Ripk1Q60855 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC16.28■□□□□ 0.2
Ripk1Q60855 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ripk1Q60855 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ripk1Q60855 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ripk1Q60855 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ripk1Q60855 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ripk1Q60855 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ripk1Q60855 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Ripk1Q60855 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Ripk1Q60855 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ripk1Q60855 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ripk1Q60855 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ripk1Q60855 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Ripk1Q60855 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ripk1Q60855 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ripk1Q60855 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Ripk1Q60855 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ripk1Q60855 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ripk1Q60855 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Ripk1Q60855 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC16.27■□□□□ 0.19
Ripk1Q60855 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.19
Ripk1Q60855 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ripk1Q60855 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ripk1Q60855 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ripk1Q60855 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ripk1Q60855 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC16.26■□□□□ 0.19
Ripk1Q60855 Gm12669-201ENSMUST00000122162 1009 ntBASIC16.26■□□□□ 0.19
Ripk1Q60855 Gm10653-202ENSMUST00000139570 835 ntBASIC16.26■□□□□ 0.19
Ripk1Q60855 Gm20760-201ENSMUST00000179197 648 ntBASIC16.26■□□□□ 0.19
Ripk1Q60855 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC16.26■□□□□ 0.19
Ripk1Q60855 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ripk1Q60855 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC16.26■□□□□ 0.19
Ripk1Q60855 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC16.26■□□□□ 0.19
Ripk1Q60855 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Ripk1Q60855 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ripk1Q60855 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ripk1Q60855 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Ripk1Q60855 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ripk1Q60855 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ripk1Q60855 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ripk1Q60855 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ripk1Q60855 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Ripk1Q60855 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ripk1Q60855 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ripk1Q60855 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms