Protein–RNA interactions for Protein: Q5SV66

Ccdc42, Coiled-coil domain-containing protein 42, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc42Q5SV66 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc42Q5SV66 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc42Q5SV66 Gm37820-201ENSMUST00000194021 2147 ntBASIC18.65■□□□□ 0.58
Ccdc42Q5SV66 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc42Q5SV66 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc42Q5SV66 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc42Q5SV66 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc42Q5SV66 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc42Q5SV66 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Ccdc42Q5SV66 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Ccdc42Q5SV66 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC18.64■□□□□ 0.58
Ccdc42Q5SV66 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.64■□□□□ 0.57
Ccdc42Q5SV66 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC18.64■□□□□ 0.57
Ccdc42Q5SV66 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc42Q5SV66 Gm13216-201ENSMUST00000117145 591 ntBASIC18.64■□□□□ 0.57
Ccdc42Q5SV66 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC18.64■□□□□ 0.57
Ccdc42Q5SV66 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc42Q5SV66 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC18.64■□□□□ 0.57
Ccdc42Q5SV66 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC18.64■□□□□ 0.57
Ccdc42Q5SV66 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc42Q5SV66 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc42Q5SV66 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Ccdc42Q5SV66 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc42Q5SV66 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc42Q5SV66 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Ccdc42Q5SV66 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc42Q5SV66 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc42Q5SV66 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc42Q5SV66 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc42Q5SV66 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc42Q5SV66 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc42Q5SV66 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Ccdc42Q5SV66 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc42Q5SV66 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc42Q5SV66 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc42Q5SV66 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc42Q5SV66 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC18.63■□□□□ 0.57
Ccdc42Q5SV66 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc42Q5SV66 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18.63■□□□□ 0.57
Ccdc42Q5SV66 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.63■□□□□ 0.57
Ccdc42Q5SV66 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc42Q5SV66 Gm5874-201ENSMUST00000096101 508 ntBASIC18.63■□□□□ 0.57
Ccdc42Q5SV66 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC18.63■□□□□ 0.57
Ccdc42Q5SV66 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc42Q5SV66 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc42Q5SV66 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc42Q5SV66 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc42Q5SV66 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc42Q5SV66 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
Ccdc42Q5SV66 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc42Q5SV66 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc42Q5SV66 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc42Q5SV66 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc42Q5SV66 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc42Q5SV66 Gm7290-201ENSMUST00000104990 617 ntBASIC18.62■□□□□ 0.57
Ccdc42Q5SV66 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc42Q5SV66 Gm12918-201ENSMUST00000120234 636 ntBASIC18.62■□□□□ 0.57
Ccdc42Q5SV66 Gm15710-201ENSMUST00000121821 636 ntBASIC18.62■□□□□ 0.57
Ccdc42Q5SV66 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC18.62■□□□□ 0.57
Ccdc42Q5SV66 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Ccdc42Q5SV66 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc42Q5SV66 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc42Q5SV66 Gm5075-201ENSMUST00000196916 622 ntBASIC18.62■□□□□ 0.57
Ccdc42Q5SV66 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Ccdc42Q5SV66 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc42Q5SV66 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Ccdc42Q5SV66 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.62■□□□□ 0.57
Ccdc42Q5SV66 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.62■□□□□ 0.57
Ccdc42Q5SV66 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Ccdc42Q5SV66 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC18.62■□□□□ 0.57
Ccdc42Q5SV66 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc42Q5SV66 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Ccdc42Q5SV66 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc42Q5SV66 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc42Q5SV66 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc42Q5SV66 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc42Q5SV66 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Ccdc42Q5SV66 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc42Q5SV66 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC18.61■□□□□ 0.57
Ccdc42Q5SV66 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc42Q5SV66 Wnt10b-205ENSMUST00000226846 1204 ntBASIC18.61■□□□□ 0.57
Ccdc42Q5SV66 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc42Q5SV66 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Ccdc42Q5SV66 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc42Q5SV66 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
Ccdc42Q5SV66 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Ccdc42Q5SV66 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Ccdc42Q5SV66 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc42Q5SV66 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc42Q5SV66 Gm6211-202ENSMUST00000167849 925 ntBASIC18.6■□□□□ 0.57
Ccdc42Q5SV66 Gm44549-201ENSMUST00000208351 577 ntBASIC18.6■□□□□ 0.57
Ccdc42Q5SV66 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC18.6■□□□□ 0.57
Ccdc42Q5SV66 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc42Q5SV66 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC18.6■□□□□ 0.57
Ccdc42Q5SV66 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc42Q5SV66 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Ccdc42Q5SV66 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc42Q5SV66 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
Ccdc42Q5SV66 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc42Q5SV66 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms