Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trav2Q5R1I9 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Trav2Q5R1I9 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav2Q5R1I9 Gm7638-201ENSMUST00000121348 967 ntBASIC13.79□□□□□ -0.2
Trav2Q5R1I9 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC13.79□□□□□ -0.2
Trav2Q5R1I9 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav2Q5R1I9 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trav2Q5R1I9 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav2Q5R1I9 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav2Q5R1I9 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Trav2Q5R1I9 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trav2Q5R1I9 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trav2Q5R1I9 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Trav2Q5R1I9 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
Trav2Q5R1I9 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav2Q5R1I9 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav2Q5R1I9 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav2Q5R1I9 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav2Q5R1I9 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav2Q5R1I9 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav2Q5R1I9 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC13.78□□□□□ -0.2
Trav2Q5R1I9 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC13.78□□□□□ -0.2
Trav2Q5R1I9 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav2Q5R1I9 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav2Q5R1I9 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC13.78□□□□□ -0.2
Trav2Q5R1I9 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav2Q5R1I9 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav2Q5R1I9 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav2Q5R1I9 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav2Q5R1I9 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav2Q5R1I9 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Trav2Q5R1I9 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav2Q5R1I9 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav2Q5R1I9 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav2Q5R1I9 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav2Q5R1I9 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav2Q5R1I9 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC13.78□□□□□ -0.2
Trav2Q5R1I9 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trav2Q5R1I9 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trav2Q5R1I9 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Trav2Q5R1I9 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav2Q5R1I9 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trav2Q5R1I9 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC13.77□□□□□ -0.21
Trav2Q5R1I9 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav2Q5R1I9 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC13.77□□□□□ -0.21
Trav2Q5R1I9 Gm45141-201ENSMUST00000206502 1888 ntBASIC13.77□□□□□ -0.21
Trav2Q5R1I9 Gm9731-201ENSMUST00000209480 747 ntBASIC13.77□□□□□ -0.21
Trav2Q5R1I9 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC13.77□□□□□ -0.21
Trav2Q5R1I9 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav2Q5R1I9 Idnk-204ENSMUST00000226010 1898 ntBASIC13.77□□□□□ -0.21
Trav2Q5R1I9 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav2Q5R1I9 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav2Q5R1I9 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav2Q5R1I9 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Trav2Q5R1I9 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trav2Q5R1I9 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav2Q5R1I9 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trav2Q5R1I9 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav2Q5R1I9 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav2Q5R1I9 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav2Q5R1I9 Gm44832-201ENSMUST00000208849 2303 ntBASIC13.76□□□□□ -0.21
Trav2Q5R1I9 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav2Q5R1I9 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav2Q5R1I9 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav2Q5R1I9 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Trav2Q5R1I9 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav2Q5R1I9 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav2Q5R1I9 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav2Q5R1I9 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC13.76□□□□□ -0.21
Trav2Q5R1I9 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC13.76□□□□□ -0.21
Trav2Q5R1I9 Mir5130-201ENSMUST00000175160 84 ntBASIC13.76□□□□□ -0.21
Trav2Q5R1I9 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
Trav2Q5R1I9 Gm45058-201ENSMUST00000205810 766 ntBASIC13.76□□□□□ -0.21
Trav2Q5R1I9 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC13.76□□□□□ -0.21
Trav2Q5R1I9 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav2Q5R1I9 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav2Q5R1I9 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Trav2Q5R1I9 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav2Q5R1I9 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC13.76□□□□□ -0.21
Trav2Q5R1I9 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav2Q5R1I9 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav2Q5R1I9 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav2Q5R1I9 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav2Q5R1I9 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav2Q5R1I9 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Trav2Q5R1I9 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav2Q5R1I9 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
Trav2Q5R1I9 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav2Q5R1I9 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav2Q5R1I9 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC13.75□□□□□ -0.21
Trav2Q5R1I9 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Trav2Q5R1I9 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC13.75□□□□□ -0.21
Trav2Q5R1I9 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC13.75□□□□□ -0.21
Trav2Q5R1I9 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC13.75□□□□□ -0.21
Trav2Q5R1I9 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav2Q5R1I9 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav2Q5R1I9 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav2Q5R1I9 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Trav2Q5R1I9 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav2Q5R1I9 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms