Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC14.53□□□□□ -0.08
Trav6d-4Q5R1I0 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6d-4Q5R1I0 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Trav6d-4Q5R1I0 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6d-4Q5R1I0 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6d-4Q5R1I0 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav6d-4Q5R1I0 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav6d-4Q5R1I0 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Trav6d-4Q5R1I0 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav6d-4Q5R1I0 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav6d-4Q5R1I0 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav6d-4Q5R1I0 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav6d-4Q5R1I0 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC14.52□□□□□ -0.09
Trav6d-4Q5R1I0 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trav6d-4Q5R1I0 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Trav6d-4Q5R1I0 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Trav6d-4Q5R1I0 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav6d-4Q5R1I0 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav6d-4Q5R1I0 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
Trav6d-4Q5R1I0 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav6d-4Q5R1I0 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav6d-4Q5R1I0 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav6d-4Q5R1I0 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC14.52□□□□□ -0.09
Trav6d-4Q5R1I0 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6d-4Q5R1I0 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6d-4Q5R1I0 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6d-4Q5R1I0 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Trav6d-4Q5R1I0 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6d-4Q5R1I0 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6d-4Q5R1I0 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6d-4Q5R1I0 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC14.51□□□□□ -0.09
Trav6d-4Q5R1I0 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6d-4Q5R1I0 Gm4217-201ENSMUST00000182243 1002 ntBASIC14.51□□□□□ -0.09
Trav6d-4Q5R1I0 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6d-4Q5R1I0 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6d-4Q5R1I0 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6d-4Q5R1I0 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6d-4Q5R1I0 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6d-4Q5R1I0 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6d-4Q5R1I0 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
Trav6d-4Q5R1I0 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6d-4Q5R1I0 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6d-4Q5R1I0 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6d-4Q5R1I0 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6d-4Q5R1I0 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6d-4Q5R1I0 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6d-4Q5R1I0 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6d-4Q5R1I0 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6d-4Q5R1I0 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6d-4Q5R1I0 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6d-4Q5R1I0 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6d-4Q5R1I0 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6d-4Q5R1I0 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6d-4Q5R1I0 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
Trav6d-4Q5R1I0 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC14.5□□□□□ -0.09
Trav6d-4Q5R1I0 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6d-4Q5R1I0 Gm17661-201ENSMUST00000170317 270 ntBASIC14.5□□□□□ -0.09
Trav6d-4Q5R1I0 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6d-4Q5R1I0 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC14.5□□□□□ -0.09
Trav6d-4Q5R1I0 AC120002.2-201ENSMUST00000220205 773 ntBASIC14.5□□□□□ -0.09
Trav6d-4Q5R1I0 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC14.5□□□□□ -0.09
Trav6d-4Q5R1I0 Il3ra-202ENSMUST00000223589 738 ntBASIC14.5□□□□□ -0.09
Trav6d-4Q5R1I0 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6d-4Q5R1I0 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6d-4Q5R1I0 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Trav6d-4Q5R1I0 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Trav6d-4Q5R1I0 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6d-4Q5R1I0 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC14.5□□□□□ -0.09
Trav6d-4Q5R1I0 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6d-4Q5R1I0 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6d-4Q5R1I0 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6d-4Q5R1I0 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6d-4Q5R1I0 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6d-4Q5R1I0 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6d-4Q5R1I0 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6d-4Q5R1I0 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6d-4Q5R1I0 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Trav6d-4Q5R1I0 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6d-4Q5R1I0 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
Trav6d-4Q5R1I0 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6d-4Q5R1I0 Mir5130-201ENSMUST00000175160 84 ntBASIC14.49□□□□□ -0.09
Trav6d-4Q5R1I0 Gm7977-201ENSMUST00000193787 748 ntBASIC14.49□□□□□ -0.09
Trav6d-4Q5R1I0 Gm45058-201ENSMUST00000205810 766 ntBASIC14.49□□□□□ -0.09
Trav6d-4Q5R1I0 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6d-4Q5R1I0 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6d-4Q5R1I0 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6d-4Q5R1I0 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC14.49□□□□□ -0.09
Trav6d-4Q5R1I0 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6d-4Q5R1I0 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6d-4Q5R1I0 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6d-4Q5R1I0 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6d-4Q5R1I0 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6d-4Q5R1I0 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6d-4Q5R1I0 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6d-4Q5R1I0 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6d-4Q5R1I0 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6d-4Q5R1I0 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6d-4Q5R1I0 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6d-4Q5R1I0 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Trav6d-4Q5R1I0 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms