Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav8d-1Q5R1H8 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav8d-1Q5R1H8 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav8d-1Q5R1H8 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Trav8d-1Q5R1H8 Gm7290-201ENSMUST00000104990 617 ntBASIC14.17□□□□□ -0.14
Trav8d-1Q5R1H8 Gm12918-201ENSMUST00000120234 636 ntBASIC14.17□□□□□ -0.14
Trav8d-1Q5R1H8 Gm15710-201ENSMUST00000121821 636 ntBASIC14.17□□□□□ -0.14
Trav8d-1Q5R1H8 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC14.17□□□□□ -0.14
Trav8d-1Q5R1H8 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Trav8d-1Q5R1H8 Gm5075-201ENSMUST00000196916 622 ntBASIC14.17□□□□□ -0.14
Trav8d-1Q5R1H8 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC14.17□□□□□ -0.14
Trav8d-1Q5R1H8 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC14.17□□□□□ -0.14
Trav8d-1Q5R1H8 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav8d-1Q5R1H8 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav8d-1Q5R1H8 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Trav8d-1Q5R1H8 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav8d-1Q5R1H8 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav8d-1Q5R1H8 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav8d-1Q5R1H8 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Trav8d-1Q5R1H8 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav8d-1Q5R1H8 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav8d-1Q5R1H8 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav8d-1Q5R1H8 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav8d-1Q5R1H8 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Trav8d-1Q5R1H8 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav8d-1Q5R1H8 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav8d-1Q5R1H8 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC14.16□□□□□ -0.14
Trav8d-1Q5R1H8 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav8d-1Q5R1H8 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav8d-1Q5R1H8 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Trav8d-1Q5R1H8 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav8d-1Q5R1H8 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav8d-1Q5R1H8 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav8d-1Q5R1H8 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC14.16□□□□□ -0.14
Trav8d-1Q5R1H8 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav8d-1Q5R1H8 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav8d-1Q5R1H8 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav8d-1Q5R1H8 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav8d-1Q5R1H8 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav8d-1Q5R1H8 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Trav8d-1Q5R1H8 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav8d-1Q5R1H8 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav8d-1Q5R1H8 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav8d-1Q5R1H8 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav8d-1Q5R1H8 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Trav8d-1Q5R1H8 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav8d-1Q5R1H8 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav8d-1Q5R1H8 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav8d-1Q5R1H8 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav8d-1Q5R1H8 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav8d-1Q5R1H8 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Trav8d-1Q5R1H8 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC14.15□□□□□ -0.14
Trav8d-1Q5R1H8 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav8d-1Q5R1H8 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC14.15□□□□□ -0.14
Trav8d-1Q5R1H8 Gm6420-201ENSMUST00000193885 723 ntBASIC14.15□□□□□ -0.14
Trav8d-1Q5R1H8 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav8d-1Q5R1H8 Gm19094-201ENSMUST00000209791 1246 ntBASIC14.15□□□□□ -0.14
Trav8d-1Q5R1H8 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav8d-1Q5R1H8 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Trav8d-1Q5R1H8 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Trav8d-1Q5R1H8 Gm10602-201ENSMUST00000098239 609 ntBASIC14.15□□□□□ -0.14
Trav8d-1Q5R1H8 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav8d-1Q5R1H8 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Trav8d-1Q5R1H8 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav8d-1Q5R1H8 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav8d-1Q5R1H8 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav8d-1Q5R1H8 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Trav8d-1Q5R1H8 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.15
Trav8d-1Q5R1H8 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Trav8d-1Q5R1H8 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Trav8d-1Q5R1H8 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav8d-1Q5R1H8 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Trav8d-1Q5R1H8 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav8d-1Q5R1H8 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC14.14□□□□□ -0.15
Trav8d-1Q5R1H8 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav8d-1Q5R1H8 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav8d-1Q5R1H8 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav8d-1Q5R1H8 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav8d-1Q5R1H8 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav8d-1Q5R1H8 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav8d-1Q5R1H8 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
Trav8d-1Q5R1H8 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav8d-1Q5R1H8 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC14.14□□□□□ -0.15
Trav8d-1Q5R1H8 Mir5133-201ENSMUST00000174955 77 ntBASIC14.14□□□□□ -0.15
Trav8d-1Q5R1H8 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC14.14□□□□□ -0.15
Trav8d-1Q5R1H8 Gm42555-201ENSMUST00000199304 1039 ntBASIC14.14□□□□□ -0.15
Trav8d-1Q5R1H8 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC14.14□□□□□ -0.15
Trav8d-1Q5R1H8 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav8d-1Q5R1H8 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav8d-1Q5R1H8 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Trav8d-1Q5R1H8 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav8d-1Q5R1H8 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav8d-1Q5R1H8 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav8d-1Q5R1H8 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav8d-1Q5R1H8 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav8d-1Q5R1H8 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav8d-1Q5R1H8 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav8d-1Q5R1H8 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav8d-1Q5R1H8 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav8d-1Q5R1H8 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms