Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav3-3Q5R1C3 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav3-3Q5R1C3 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav3-3Q5R1C3 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav3-3Q5R1C3 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav3-3Q5R1C3 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC12.99□□□□□ -0.33
Trav3-3Q5R1C3 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav3-3Q5R1C3 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Trav3-3Q5R1C3 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav3-3Q5R1C3 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC12.99□□□□□ -0.33
Trav3-3Q5R1C3 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav3-3Q5R1C3 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav3-3Q5R1C3 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Trav3-3Q5R1C3 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav3-3Q5R1C3 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav3-3Q5R1C3 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav3-3Q5R1C3 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Trav3-3Q5R1C3 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Trav3-3Q5R1C3 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav3-3Q5R1C3 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav3-3Q5R1C3 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav3-3Q5R1C3 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav3-3Q5R1C3 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav3-3Q5R1C3 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav3-3Q5R1C3 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav3-3Q5R1C3 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav3-3Q5R1C3 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav3-3Q5R1C3 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav3-3Q5R1C3 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav3-3Q5R1C3 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav3-3Q5R1C3 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav3-3Q5R1C3 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav3-3Q5R1C3 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav3-3Q5R1C3 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC12.98□□□□□ -0.33
Trav3-3Q5R1C3 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav3-3Q5R1C3 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC12.98□□□□□ -0.33
Trav3-3Q5R1C3 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav3-3Q5R1C3 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC12.98□□□□□ -0.33
Trav3-3Q5R1C3 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav3-3Q5R1C3 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav3-3Q5R1C3 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav3-3Q5R1C3 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav3-3Q5R1C3 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav3-3Q5R1C3 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav3-3Q5R1C3 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav3-3Q5R1C3 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC12.98□□□□□ -0.33
Trav3-3Q5R1C3 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav3-3Q5R1C3 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Trav3-3Q5R1C3 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav3-3Q5R1C3 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav3-3Q5R1C3 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav3-3Q5R1C3 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC12.97□□□□□ -0.33
Trav3-3Q5R1C3 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav3-3Q5R1C3 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Trav3-3Q5R1C3 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav3-3Q5R1C3 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav3-3Q5R1C3 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav3-3Q5R1C3 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav3-3Q5R1C3 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav3-3Q5R1C3 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav3-3Q5R1C3 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav3-3Q5R1C3 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav3-3Q5R1C3 AC137127.1-201ENSMUST00000213466 1078 ntBASIC12.97□□□□□ -0.33
Trav3-3Q5R1C3 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav3-3Q5R1C3 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav3-3Q5R1C3 Gm32699-201ENSMUST00000221728 1988 ntBASIC12.97□□□□□ -0.33
Trav3-3Q5R1C3 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Trav3-3Q5R1C3 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav3-3Q5R1C3 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav3-3Q5R1C3 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC12.97□□□□□ -0.33
Trav3-3Q5R1C3 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav3-3Q5R1C3 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav3-3Q5R1C3 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav3-3Q5R1C3 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav3-3Q5R1C3 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC12.97□□□□□ -0.33
Trav3-3Q5R1C3 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav3-3Q5R1C3 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav3-3Q5R1C3 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC12.97□□□□□ -0.33
Trav3-3Q5R1C3 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC12.97□□□□□ -0.33
Trav3-3Q5R1C3 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav3-3Q5R1C3 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC12.96□□□□□ -0.33
Trav3-3Q5R1C3 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav3-3Q5R1C3 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav3-3Q5R1C3 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav3-3Q5R1C3 Gm45212-201ENSMUST00000205831 3403 ntBASIC12.96□□□□□ -0.33
Trav3-3Q5R1C3 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Trav3-3Q5R1C3 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Trav3-3Q5R1C3 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav3-3Q5R1C3 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav3-3Q5R1C3 AC153526.5-201ENSMUST00000218661 2147 ntBASIC12.96□□□□□ -0.33
Trav3-3Q5R1C3 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Trav3-3Q5R1C3 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav3-3Q5R1C3 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav3-3Q5R1C3 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav3-3Q5R1C3 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC12.96□□□□□ -0.33
Trav3-3Q5R1C3 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav3-3Q5R1C3 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav3-3Q5R1C3 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Trav3-3Q5R1C3 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Trav3-3Q5R1C3 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms