Protein–RNA interactions for Protein: Q5M6W3

Clhc1, Clathrin heavy chain linker domain-containing protein 1, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clhc1Q5M6W3 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Clhc1Q5M6W3 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Clhc1Q5M6W3 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Clhc1Q5M6W3 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.67■□□□□ 0.26
Clhc1Q5M6W3 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Clhc1Q5M6W3 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC16.67■□□□□ 0.26
Clhc1Q5M6W3 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Clhc1Q5M6W3 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Clhc1Q5M6W3 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC16.67■□□□□ 0.26
Clhc1Q5M6W3 AC164629.5-201ENSMUST00000220387 632 ntBASIC16.67■□□□□ 0.26
Clhc1Q5M6W3 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC16.67■□□□□ 0.26
Clhc1Q5M6W3 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Clhc1Q5M6W3 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Clhc1Q5M6W3 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Clhc1Q5M6W3 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Clhc1Q5M6W3 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Clhc1Q5M6W3 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Clhc1Q5M6W3 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC16.67■□□□□ 0.26
Clhc1Q5M6W3 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Clhc1Q5M6W3 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Clhc1Q5M6W3 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC16.66■□□□□ 0.26
Clhc1Q5M6W3 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Clhc1Q5M6W3 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clhc1Q5M6W3 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clhc1Q5M6W3 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Clhc1Q5M6W3 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Clhc1Q5M6W3 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clhc1Q5M6W3 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clhc1Q5M6W3 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Clhc1Q5M6W3 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clhc1Q5M6W3 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Clhc1Q5M6W3 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Clhc1Q5M6W3 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clhc1Q5M6W3 Idnk-204ENSMUST00000226010 1898 ntBASIC16.65■□□□□ 0.26
Clhc1Q5M6W3 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Clhc1Q5M6W3 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clhc1Q5M6W3 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clhc1Q5M6W3 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Clhc1Q5M6W3 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clhc1Q5M6W3 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clhc1Q5M6W3 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clhc1Q5M6W3 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clhc1Q5M6W3 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clhc1Q5M6W3 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Clhc1Q5M6W3 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC16.65■□□□□ 0.26
Clhc1Q5M6W3 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC16.65■□□□□ 0.26
Clhc1Q5M6W3 Gm26917-202ENSMUST00000192833 3329 ntBASIC16.65■□□□□ 0.26
Clhc1Q5M6W3 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.65■□□□□ 0.26
Clhc1Q5M6W3 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clhc1Q5M6W3 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clhc1Q5M6W3 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clhc1Q5M6W3 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Clhc1Q5M6W3 Gm38345-201ENSMUST00000192635 1748 ntBASIC16.65■□□□□ 0.26
Clhc1Q5M6W3 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.26
Clhc1Q5M6W3 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clhc1Q5M6W3 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.64■□□□□ 0.25
Clhc1Q5M6W3 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clhc1Q5M6W3 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clhc1Q5M6W3 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Clhc1Q5M6W3 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clhc1Q5M6W3 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clhc1Q5M6W3 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Clhc1Q5M6W3 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC16.64■□□□□ 0.25
Clhc1Q5M6W3 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Clhc1Q5M6W3 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Clhc1Q5M6W3 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC16.64■□□□□ 0.25
Clhc1Q5M6W3 Gm37179-201ENSMUST00000194862 823 ntBASIC16.64■□□□□ 0.25
Clhc1Q5M6W3 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC16.64■□□□□ 0.25
Clhc1Q5M6W3 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Clhc1Q5M6W3 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Clhc1Q5M6W3 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clhc1Q5M6W3 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clhc1Q5M6W3 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Clhc1Q5M6W3 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clhc1Q5M6W3 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Clhc1Q5M6W3 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Clhc1Q5M6W3 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clhc1Q5M6W3 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clhc1Q5M6W3 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clhc1Q5M6W3 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
Clhc1Q5M6W3 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clhc1Q5M6W3 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clhc1Q5M6W3 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clhc1Q5M6W3 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.63■□□□□ 0.25
Clhc1Q5M6W3 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clhc1Q5M6W3 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clhc1Q5M6W3 Gm7290-201ENSMUST00000104990 617 ntBASIC16.63■□□□□ 0.25
Clhc1Q5M6W3 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC16.63■□□□□ 0.25
Clhc1Q5M6W3 Gm12918-201ENSMUST00000120234 636 ntBASIC16.63■□□□□ 0.25
Clhc1Q5M6W3 Gm15710-201ENSMUST00000121821 636 ntBASIC16.63■□□□□ 0.25
Clhc1Q5M6W3 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC16.63■□□□□ 0.25
Clhc1Q5M6W3 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Clhc1Q5M6W3 Gm5075-201ENSMUST00000196916 622 ntBASIC16.63■□□□□ 0.25
Clhc1Q5M6W3 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC16.63■□□□□ 0.25
Clhc1Q5M6W3 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC16.63■□□□□ 0.25
Clhc1Q5M6W3 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.63■□□□□ 0.25
Clhc1Q5M6W3 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Clhc1Q5M6W3 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clhc1Q5M6W3 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clhc1Q5M6W3 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms